Hi Johannes,
On 07/12/2016 09:06 AM, Johannes Helmuth wrote:
Dear Bioconductor Developers, I use `Rhtslib` in two Bioconductor packages, namely `bamsignals` and `normr`. Apparently, the development version of `Rhtslib` (version 1.5.3) fails on install because automake is not available on the Bioconductor build system (see http://bioconductor.org/checkResults/devel/bioc-LATEST/Rhtslib/zin1-install.html):
> /home/biocbuild/bbs-3.4-bioc/meat/Rhtslib/src/htslib/missing: line
81: automake-1.14: command not found WARNING: 'automake-1.14' is missing on your system. Can this be fixed in the near future, s.t. my packages are built again?
We committed a fix for this. Thanks to Martin for the fix. It's in Rhtslib 1.5.4, which will become available on Friday. Cheers, H.
Thank you very much, Johannes Helmuth
_______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319