Hello BioC group, I've recently moved my package repo from svn to github. Just noticed that the changes in the github repo aren't visible in either the release or devel version of BioC. e.g. I updated the Vignette and the new date on it should be 8 Dec 2017, but it's still at 27 Jan 2017. I've followed the steps from here: https://bioconductor.org/developers/how-to/git/push-to-github-bioc/ What else do I need to do to sync updates to BioC? Here is the github repo: https://github.com/shraddhapai/IdeoViz Thanks,Shraddha ---- Shraddha Pai Post-doctoral Fellow, http://baderlab.org The Donnelly Center, University of Toronto
[Bioc-devel] Can't see updates from git repo in BioC package
3 messages · Martin Morgan, Shraddha Pai
On 02/01/2018 11:09 AM, Shraddha Pai wrote:
Hello BioC group, I've recently moved my package repo from svn to github. Just noticed that the changes in the github repo aren't visible in either the release or devel version of BioC. e.g. I updated the Vignette and the new date on it should be 8 Dec 2017, but it's still at 27 Jan 2017. I've followed the steps from here: https://bioconductor.org/developers/how-to/git/push-to-github-bioc/ What else do I need to do to sync updates to BioC? Here is the github repo: https://github.com/shraddhapai/IdeoViz
Hi Shraddha -- check out the nightly build report http://bioconductor.org/checkResults/ http://bioconductor.org/checkResults/3.7/bioc-LATEST/IdeoViz/malbec2-buildsrc.html Looks like there is a problem with your commit (a typo at the top of the vignette) that causes the package to fail to build, and hence to propagate. Martin
Thanks,Shraddha ---- Shraddha Pai Post-doctoral Fellow, http://baderlab.org The Donnelly Center, University of Toronto [[alternative HTML version deleted]]
_______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
This email message may contain legally privileged and/or...{{dropped:2}}
Hi Martin, Ah, thank you for pointing out the build report page and the typo at the top of the vignette. I'll bookmark the page for quick checking in the future. Best,Shraddha On Thu, Feb 1, 2018 at 4:42 PM, Martin Morgan <martin.morgan at roswellpark.org
wrote:
On 02/01/2018 11:09 AM, Shraddha Pai wrote:
Hello BioC group, I've recently moved my package repo from svn to github. Just noticed that the changes in the github repo aren't visible in either the release or devel version of BioC. e.g. I updated the Vignette and the new date on it should be 8 Dec 2017, but it's still at 27 Jan 2017. I've followed the steps from here: https://bioconductor.org/developers/how-to/git/push-to-github-bioc/ What else do I need to do to sync updates to BioC? Here is the github repo: https://github.com/shraddhapai/IdeoViz
Hi Shraddha -- check out the nightly build report http://bioconductor.org/checkResults/ http://bioconductor.org/checkResults/3.7/bioc-LATEST/IdeoViz /malbec2-buildsrc.html Looks like there is a problem with your commit (a typo at the top of the vignette) that causes the package to fail to build, and hence to propagate. Martin
Thanks,Shraddha ---- Shraddha Pai Post-doctoral Fellow, http://baderlab.org The Donnelly Center, University of Toronto [[alternative HTML version deleted]]
_______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.