Hi all, I'm writing some functions dealing with sets or lists of genes. There has been a discussion about classes for representing gene sets: http://wiki.fhcrc.org/bioc/GeneSet_Class_Discussion Has someone implemented the discussed ideas or do I have to implement my own classes? It seems that the discussion has been stop a few month ago. Regards, Hans-Ulrich
[Bioc-devel] classes for gene sets
3 messages · Hans-Ulrich Klein, Vincent Carey
Thanks! That seems to be a good starting point. Hans-Ulrich
Vincent Carey 525-2265 wrote:
have you looked at bioconductor GSEABase? lots of infrastructure there.
I'm writing some functions dealing with sets or lists of genes. There has been a discussion about classes for representing gene sets: http://wiki.fhcrc.org/bioc/GeneSet_Class_Discussion Has someone implemented the discussed ideas or do I have to implement my own classes? It seems that the discussion has been stop a few month ago. Regards, Hans-Ulrich
have you looked at bioconductor GSEABase? lots of infrastructure there. --- Vince Carey, PhD Assoc. Prof Med (Biostatistics) Harvard Medical School Channing Laboratory - ph 6175252265 fa 6177311541 181 Longwood Ave Boston MA 02115 USA stvjc at channing.harvard.edu
On Thu, 20 Dec 2007, Hans-Ulrich Klein wrote:
Hi all, I'm writing some functions dealing with sets or lists of genes. There has been a discussion about classes for representing gene sets: http://wiki.fhcrc.org/bioc/GeneSet_Class_Discussion Has someone implemented the discussed ideas or do I have to implement my own classes? It seems that the discussion has been stop a few month ago. Regards, Hans-Ulrich
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