Hello, I maintain the ENCODExplorerData package. Recently, it has come to our attention that changes to some of the online ENCODE data we rely on broke one of our helper functions, and I pushed a fix to BioConductor devel. However, I can't see our package in the ExperimentData build log, either for BioConductor 3.9 or 3.10 (https://www.bioconductor.org/checkResults/3.10/data-experiment-LATEST/). Am I looking in the wrong place? Thanks for your time, -Eric
[Bioc-devel] Experiment package does not appear in build report
2 messages · Éric Fournier, Shepherd, Lori
The ENCODExplorerData package was added as an annotation package not as a data experiment package. While you should continue to push changes to the git repository please let us know when you need this annotation package updated on Bioconductor. It will need to be added manually as annotation packages are currently not auto-propagated. We are in the process of moving these types of packages to automatic git process but it is still in development Daniel can you please grab the latest version of the package from our git server and please make sure it gets on the builder. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of ?ric Fournier <Fournier.Eric.2 at crchudequebec.ulaval.ca>
Sent: Friday, September 13, 2019 9:51 AM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] Experiment package does not appear in build report
Sent: Friday, September 13, 2019 9:51 AM
To: bioc-devel at r-project.org <bioc-devel at r-project.org>
Subject: [Bioc-devel] Experiment package does not appear in build report
Hello, I maintain the ENCODExplorerData package. Recently, it has come to our attention that changes to some of the online ENCODE data we rely on broke one of our helper functions, and I pushed a fix to BioConductor devel. However, I can't see our package in the ExperimentData build log, either for BioConductor 3.9 or 3.10 (https://www.bioconductor.org/checkResults/3.10/data-experiment-LATEST/). Am I looking in the wrong place? Thanks for your time, -Eric [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.