Hello Bioconductor Core Team, We use bitbucket to host all our software repositories. Is there a way to submit a bitbucket URL for a new bioconductor package or does it need to be from github? If it has to be in github, do we need to maintain the original repository that created the initial bioconductor package request or is it possible to remove this repository and only use the forked bioconductor github repository after a package is accepted? Any advice on using bitbucket repositories when submitting packages to bioconductor would be greatly appreciated! Thank you, Lauren McIver Senior Software Developer The Huttenhower Lab Department of Biostatistics Harvard T.H. Chan School of Public Health
[Bioc-devel] package submission from bitbucket
3 messages · Shepherd, Lori, Lauren McIver
Lauren, Thank you for your interest in submitting to Bioconductor. Currently we only support the use of github for package submission. After the package has been accepted through the review process, it does not have to remain in github. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Lauren McIver <lauren.j.mciver at gmail.com>
Sent: Tuesday, October 4, 2016 2:51:08 PM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] package submission from bitbucket
Sent: Tuesday, October 4, 2016 2:51:08 PM
To: bioc-devel at r-project.org
Subject: [Bioc-devel] package submission from bitbucket
Hello Bioconductor Core Team,
We use bitbucket to host all our software repositories. Is there a way to
submit a bitbucket URL for a new bioconductor package or does it need to be
from github? If it has to be in github, do we need to maintain the original
repository that created the initial bioconductor package request or is it
possible to remove this repository and only use the forked bioconductor
github repository after a package is accepted?
Any advice on using bitbucket repositories when submitting packages to
bioconductor would be greatly appreciated!
Thank you,
Lauren McIver
Senior Software Developer
The Huttenhower Lab
Department of Biostatistics
Harvard T.H. Chan School of Public Health
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Hi Lori, Thank you for the information and for the quick response! Thanks! Lauren On Tue, Oct 4, 2016 at 1:01 PM, Shepherd, Lori <
Lori.Shepherd at roswellpark.org> wrote:
Lauren,
Thank you for your interest in submitting to Bioconductor.
Currently we only support the use of github for package submission. After
the package has been accepted through the review process, it does not have
to remain in github.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
------------------------------
*From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Lauren
McIver <lauren.j.mciver at gmail.com>
*Sent:* Tuesday, October 4, 2016 2:51:08 PM
*To:* bioc-devel at r-project.org
*Subject:* [Bioc-devel] package submission from bitbucket
Hello Bioconductor Core Team,
We use bitbucket to host all our software repositories. Is there a way to
submit a bitbucket URL for a new bioconductor package or does it need to be
from github? If it has to be in github, do we need to maintain the original
repository that created the initial bioconductor package request or is it
possible to remove this repository and only use the forked bioconductor
github repository after a package is accepted?
Any advice on using bitbucket repositories when submitting packages to
bioconductor would be greatly appreciated!
Thank you,
Lauren McIver
Senior Software Developer
The Huttenhower Lab
Department of Biostatistics
Harvard T.H. Chan School of Public Health
[[alternative HTML version deleted]]
_______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.