Hi all, we have created a new package accessing ExperimentHub resources and noticed that some resources can?t be downloaded specifically on Windows when checking the package: https://bioconductor.org/spb_reports/imcdatasets_buildreport_20201124074916.html <https://bioconductor.org/spb_reports/imcdatasets_buildreport_20201124074916.html> It seems like one object can?t be loaded from cache: ?cannot allocate vector of size 133.0 Mb? on arch ?i386? while the other object can?t be downloaded: ?Internal Server Error (HTTP 500)? on arch ?x64'. Since the checks and builds are fine on Mac and Linux and the errors are inconsistent between the two Windows builds, we are not quite sure how to resolve this issue. Any help is much appreciated! Best and thanks in advance, Nils
[Bioc-devel] ExperimentHub package check fails on Windows
2 messages · Nils Eling, Shepherd, Lori
The allocation memory I don't believe has a solution besides decreasing the amount of data that is utilized. If that isn't possible there are ways to mark the package unsupported only on windows i386. We have seen some intermittent connectivity issues reported for the server and are investigating potential solutions. The x64 error should resolve itself on its own or with changes internally by the core team. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Nils Eling <nils.eling at uzh.ch>
Sent: Wednesday, December 2, 2020 4:18 AM
To: bioc-devel <bioc-devel at r-project.org>
Subject: [Bioc-devel] ExperimentHub package check fails on Windows
Sent: Wednesday, December 2, 2020 4:18 AM
To: bioc-devel <bioc-devel at r-project.org>
Subject: [Bioc-devel] ExperimentHub package check fails on Windows
Hi all, we have created a new package accessing ExperimentHub resources and noticed that some resources can?t be downloaded specifically on Windows when checking the package: https://secure-web.cisco.com/1lmKeZL7aQjVkNcPwwZIf82vNINwqVfdTtQbGnIKFM5h1MlsEABwCydduJe-CcWHR6QX4xgoPV_qWMB6Ov9q02jsxfHYvAPynWlbsINQgiIPfUJX6ULF2DC0CJs-mD70-5e8jVEH15N2TEOIYE9_a9Uz-rryiasEtNsBj5-xPdbzV6-vBfu19NU72dixJq9QVCqXlC9VcG9yCaK_asIgYbp3nK-AJ8EllL50KGaTmbqoLgSM1EP67imTusgLxjmrniyLaKNE13EfBNGECUOxs4VCQvESAUz1Uskneb9Lar0qalXe9J7Em1SkrXT9z12ETC3ZBzSYE3BdXEDqlFXVLvQ/https%3A%2F%2Fbioconductor.org%2Fspb_reports%2Fimcdatasets_buildreport_20201124074916.html <https://secure-web.cisco.com/1lmKeZL7aQjVkNcPwwZIf82vNINwqVfdTtQbGnIKFM5h1MlsEABwCydduJe-CcWHR6QX4xgoPV_qWMB6Ov9q02jsxfHYvAPynWlbsINQgiIPfUJX6ULF2DC0CJs-mD70-5e8jVEH15N2TEOIYE9_a9Uz-rryiasEtNsBj5-xPdbzV6-vBfu19NU72dixJq9QVCqXlC9VcG9yCaK_asIgYbp3nK-AJ8EllL50KGaTmbqoLgSM1EP67imTusgLxjmrniyLaKNE13EfBNGECUOxs4VCQvESAUz1Uskneb9Lar0qalXe9J7Em1SkrXT9z12ETC3ZBzSYE3BdXEDqlFXVLvQ/https%3A%2F%2Fbioconductor.org%2Fspb_reports%2Fimcdatasets_buildreport_20201124074916.html> It seems like one object can?t be loaded from cache: ?cannot allocate vector of size 133.0 Mb? on arch ?i386? while the other object can?t be downloaded: ?Internal Server Error (HTTP 500)? on arch ?x64'. Since the checks and builds are fine on Mac and Linux and the errors are inconsistent between the two Windows builds, we are not quite sure how to resolve this issue. Any help is much appreciated! Best and thanks in advance, Nils [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org mailing list https://secure-web.cisco.com/1M0EyyhqGNZMV03IF_sAAlqkxebazF9txNWGxMB788djVGa-2bVrTuH2KyItEiUY5Jm04neVo4jaHM5Ef25jYiTIRDprwvyEz3vdKRz-VoCydGMmt0xsxM06p7ZoX8vauScoYCB-e-fvnBHGuuBbILO_9-VzxfhF4226pYKltgxQBb4JjmHBRkmAcvww2UBWYT6X2KKHQTXqfCAKWKvu6UDLfWW716gflRbbO5KfmsK-UKW96vJ-sLW5LpUye_9-U5OSOuGXmPELz93AokmPspxmg32HyGZIdej0s2E6VnL-kuGZN8X-6P2RGeFvCh45AdI2ilEY-mlRxMl9NoqItqw/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.