[Bioc-devel] Need some help to submit a R package.

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

	[[alternative HTML version deleted]]

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

      [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee or
agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

Dear Sir,


I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the package
in different platform.

But after that they are not communicating any thing regarding the package.
I have checked the package
windows and Ubuntu it is working fine.

I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .

Please suggest me what should I do now ?




Thank you



Regards
Pijush




On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

      [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

        [[alternative HTML version deleted]]

Hi Pijush,

Did you open the build report which is a link to an HTML page with details
of the warning?


Regards,
Ruqian



On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,


I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the package
in different platform.

But after that they are not communicating any thing regarding the package.
I have checked the package
windows and Ubuntu it is working fine.

I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .

Please suggest me what should I do now ?




Thank you



Regards
Pijush




On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

      [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

        [[alternative HTML version deleted]]

Dear  Ruqian,


Yes sir, I have opened the build report which is a link to an HTML page
with details.
But I unable to understand why the WARNING massages are showing.

Three days before the other reviewers had made some comments and asked me
to address
those issues and also told me to solve the NOTEs produced by BioCheck.

Presently I am working on the sigFeature package to address those issues.
I shall communicate soon after solving those issues.


Thank you


Regards
Pijush



On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <ruqianl at student.unimelb.edu.au>
wrote:

Hi Pijush,

Did you open the build report which is a link to an HTML page with details
of the warning?


Regards,
Ruqian



On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,


I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the package
in different platform.

But after that they are not communicating any thing regarding the package.
I have checked the package
windows and Ubuntu it is working fine.

I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .

Please suggest me what should I do now ?




Thank you



Regards
Pijush




On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

       [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

         [[alternative HTML version deleted]]

	[[alternative HTML version deleted]]

If you are still having problems understanding warnings, it is probably
better to use the github issue -- it may take some time to get an answer,
because the reviewers have many responsibilities.

It looks like your 'webhook' is not correct, and that you are not changing
the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you
wish to generate another build report. @grimbough indicated in the github
issue how to address these problems.

Martin


On 04/16/2018 03:58 AM, Pijush Das wrote:

Dear  Ruqian,


Yes sir, I have opened the build report which is a link to an HTML page
with details.
But I unable to understand why the WARNING massages are showing.

Three days before the other reviewers had made some comments and asked me
to address
those issues and also told me to solve the NOTEs produced by BioCheck.

Presently I am working on the sigFeature package to address those issues.
I shall communicate soon after solving those issues.


Thank you


Regards
Pijush



On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <
ruqianl at student.unimelb.edu.au>
wrote:

Hi Pijush,

Did you open the build report which is a link to an HTML page with
details
of the warning?


Regards,
Ruqian



On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,

I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the
package
in different platform.

But after that they are not communicating any thing regarding the
package.
I have checked the package
windows and Ubuntu it is working fine.

I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .

Please suggest me what should I do now ?




Thank you



Regards
Pijush




On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

       [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

         [[alternative HTML version deleted]]

        [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee or
agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

We like to keep track of the changes and have the reviews in one place.
 If possible it would be better to replace the contents of existing git
repository and do a version bump.


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263
------------------------------
*From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Pijush
Das <topijush at gmail.com>
*Sent:* Tuesday, April 24, 2018 7:43:04 AM
*To:* Morgan, Martin
*Cc:* bioc-devel at r-project.org
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.

Dear Sir,

I have solved most of the issues raised by the reviewers.
There were significant amount of changes in the original code.
So should we submit our package (sigFeature) as a new submission
or replace the contents of existing git repository with version increment.


regards
Pijush


On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
martin.morgan at roswellpark.org> wrote:

If you are still having problems understanding warnings, it is probably
better to use the github issue -- it may take some time to get an answer,
because the reviewers have many responsibilities.

It looks like your 'webhook' is not correct, and that you are not

changing

the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you
wish to generate another build report. @grimbough indicated in the github
issue how to address these problems.

Martin


On 04/16/2018 03:58 AM, Pijush Das wrote:

Dear  Ruqian,


Yes sir, I have opened the build report which is a link to an HTML page
with details.
But I unable to understand why the WARNING massages are showing.

Three days before the other reviewers had made some comments and asked

me

to address
those issues and also told me to solve the NOTEs produced by BioCheck.

Presently I am working on the sigFeature package to address those

issues.

I shall communicate soon after solving those issues.


Thank you


Regards
Pijush



On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <
ruqianl at student.unimelb.edu.au>
wrote:

Hi Pijush,

Did you open the build report which is a link to an HTML page with
details
of the warning?


Regards,
Ruqian



On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <topijush at gmail.com>

wrote:

Dear Sir,

I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the
package
in different platform.

But after that they are not communicating any thing regarding the
package.
I have checked the package
windows and Ubuntu it is working fine.

I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .

Please suggest me what should I do now ?




Thank you



Regards
Pijush




On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

       [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the

employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you

have

received this message in error, please notify the sender immediately

by

e-mail and delete this email message from your computer. Thank you.

         [[alternative HTML version deleted]]

        [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

        [[alternative HTML version deleted]]

It doesn't look like the webhook was ever initialized


Please follow the instructions here:

https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#
adding-a-web-hook

After the webhook is set up you will need to do another version bump to
trigger the build -  Please post further correspondence regarding your
package submission on the open github issue


https://github.com/Bioconductor/Contributions/issues/713


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263
------------------------------
*From:* Pijush Das <topijush at gmail.com>
*Sent:* Tuesday, April 24, 2018 11:33:14 AM
*To:* Shepherd, Lori
*Cc:* Morgan, Martin; bioc-devel at r-project.org

*Subject:* Re: [Bioc-devel] Need some help to submit a R package.

Dear sir,


I have uploaded the sigFeature package ( Version: 0.99.1) in the existing
git repository and did a version bump. The link is given below.
https://github.com/pijush1285/sigFeature
 But still now I am not getting any response.
Is there required to add the web hook again ?

Thank you

regards
Pijush



On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori <
Lori.Shepherd at roswellpark.org> wrote:

We like to keep track of the changes and have the reviews in one place.
 If possible it would be better to replace the contents of existing git
repository and do a version bump.


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263
------------------------------
*From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Pijush
Das <topijush at gmail.com>
*Sent:* Tuesday, April 24, 2018 7:43:04 AM
*To:* Morgan, Martin
*Cc:* bioc-devel at r-project.org
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.

Dear Sir,

I have solved most of the issues raised by the reviewers.
There were significant amount of changes in the original code.
So should we submit our package (sigFeature) as a new submission
or replace the contents of existing git repository with version increment.


regards
Pijush


On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
martin.morgan at roswellpark.org> wrote:

If you are still having problems understanding warnings, it is probably
better to use the github issue -- it may take some time to get an answer,
because the reviewers have many responsibilities.

It looks like your 'webhook' is not correct, and that you are not

changing

the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you
wish to generate another build report. @grimbough indicated in the github
issue how to address these problems.

Martin


On 04/16/2018 03:58 AM, Pijush Das wrote:

Dear  Ruqian,


Yes sir, I have opened the build report which is a link to an HTML page
with details.
But I unable to understand why the WARNING massages are showing.

Three days before the other reviewers had made some comments and asked

me

to address
those issues and also told me to solve the NOTEs produced by BioCheck.

Presently I am working on the sigFeature package to address those

issues.

I shall communicate soon after solving those issues.


Thank you


Regards
Pijush



On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <
ruqianl at student.unimelb.edu.au>
wrote:

Hi Pijush,

Did you open the build report which is a link to an HTML page with
details
of the warning?


Regards,
Ruqian



On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <topijush at gmail.com>

wrote:

Dear Sir,

I have submitted an R package named "sigFeature" in Github and also
Bioconductor 9 days before.
The reviewers only said that there is some WARNING problem in the
package
in different platform.

But after that they are not communicating any thing regarding the
package.
I have checked the package
windows and Ubuntu it is working fine.

I unable to understand what actually the problem is ?
And the reviewers are not communicating about the problem. Though I am
getting lots of email from bioc-devel dealing with others package
problem .

Please suggest me what should I do now ?




Thank you



Regards
Pijush




On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
Nitesh.Turaga at roswellpark.org> wrote:

Hi,

Please read through this documentation.

http://bioconductor.org/developers/package-submission/


Nitesh

On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com> wrote:

Dear Sir,



I have developed an R package. I want to submit this package in
Bioconductor.
Please help me to submit the R package.









regards
Pijush Das

       [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the

employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you

have

received this message in error, please notify the sender immediately

by

e-mail and delete this email message from your computer. Thank you.

         [[alternative HTML version deleted]]

        [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee

or

agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

        [[alternative HTML version deleted]]

Dear Sir,


I have found that my package sigFeature had passed all the built test 
without errors or warnings
on all platforms.
What should I do next ?





regards
Pijush












On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori 
<Lori.Shepherd at roswellpark.org <mailto:Lori.Shepherd at roswellpark.org>> 
wrote:

    It doesn't look like the webhook was ever initialized


    Please follow the instructions here:

    https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook
    <https://github.com/Bioconductor/Contributions/blob/master/CONTRIBUTING.md#adding-a-web-hook>

    After the webhook is set up you will need to do another version bump
    to trigger the build -? Please post further correspondence regarding
    your package submission on the open github issue


    https://github.com/Bioconductor/Contributions/issues/713
    <https://github.com/Bioconductor/Contributions/issues/713>


    Lori Shepherd

    Bioconductor Core Team

    Roswell Park Cancer Institute

    Department of Biostatistics & Bioinformatics

    Elm & Carlton Streets

    Buffalo, New York 14263

    ------------------------------------------------------------------------
    *From:* Pijush Das <topijush at gmail.com <mailto:topijush at gmail.com>>
    *Sent:* Tuesday, April 24, 2018 11:33:14 AM
    *To:* Shepherd, Lori
    *Cc:* Morgan, Martin; bioc-devel at r-project.org
    <mailto:bioc-devel at r-project.org>

    *Subject:* Re: [Bioc-devel] Need some help to submit a R package.
    Dear sir,


    I have uploaded the sigFeature package ( Version: 0.99.1) in the
    existing git repository and did a version bump. The link is given below.
    https://github.com/pijush1285/sigFeature
    <https://github.com/pijush1285/sigFeature>
     ?But still now I am not getting any response.
    Is there required to add the web hook again ?

    Thank you

    regards
    Pijush



    On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori
    <Lori.Shepherd at roswellpark.org
    <mailto:Lori.Shepherd at roswellpark.org>> wrote:

        We like to keep track of the changes and have the reviews in one
        place.? ?If possible it would be better to replace the contents
        of existing git repository and do a version bump.


        Lori Shepherd

        Bioconductor Core Team

        Roswell Park Cancer Institute

        Department of Biostatistics & Bioinformatics

        Elm & Carlton Streets

        Buffalo, New York 14263

        ------------------------------------------------------------------------
        *From:* Bioc-devel <bioc-devel-bounces at r-project.org
        <mailto:bioc-devel-bounces at r-project.org>> on behalf of Pijush
        Das <topijush at gmail.com <mailto:topijush at gmail.com>>
        *Sent:* Tuesday, April 24, 2018 7:43:04 AM
        *To:* Morgan, Martin
        *Cc:* bioc-devel at r-project.org <mailto:bioc-devel at r-project.org>
        *Subject:* Re: [Bioc-devel] Need some help to submit a R package.
        Dear Sir,

        I have solved most of the issues raised by the reviewers.
        There were significant amount of changes in the original code.
        So should we submit our package (sigFeature) as a new submission
        or replace the contents of existing git repository with version
        increment.


        regards
        Pijush


        On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
        martin.morgan at roswellpark.org
        <mailto:martin.morgan at roswellpark.org>> wrote:

        > If you are still having problems understanding warnings, it is probably
        > better to use the github issue -- it may take some time to get an answer,
        > because the reviewers have many responsibilities.
        >
        > It looks like your 'webhook' is not correct, and that you are not changing
        > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...) when you
        > wish to generate another build report. @grimbough indicated in the github
        > issue how to address these problems.
        >
        > Martin
        >
        >
        > On 04/16/2018 03:58 AM, Pijush Das wrote:
        >

        >> Dear? Ruqian,
        >>
        >>
        >> Yes sir, I have opened the build report which is a link to an HTML page
        >> with details.
        >> But I unable to understand why the WARNING massages are showing.
        >>
        >> Three days before the other reviewers had made some comments and asked me
        >> to address
        >> those issues and also told me to solve the NOTEs produced by BioCheck.
        >>
        >> Presently I am working on the sigFeature package to address those issues.
        >> I shall communicate soon after solving those issues.
        >>
        >>
        >> Thank you
        >>
        >>
        >> Regards
        >> Pijush
        >>
        >>
        >>
        >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <
        >> ruqianl at student.unimelb.edu.au

        <mailto:ruqianl at student.unimelb.edu.au>>

        >> wrote:
        >>
        >> Hi Pijush,

        >>>
        >>> Did you open the build report which is a link to an HTML page with
        >>> details
        >>> of the warning?
        >>>
        >>>
        >>> Regards,
        >>> Ruqian
        >>>
        >>>
        >>>
        >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <topijush at gmail.com <mailto:topijush at gmail.com>> wrote:
        >>>
        >>> Dear Sir,

        >>>>
        >>>>
        >>>> I have submitted an R package named "sigFeature" in Github and also
        >>>> Bioconductor 9 days before.
        >>>> The reviewers only said that there is some WARNING problem in the
        >>>> package
        >>>> in different platform.
        >>>>
        >>>> But after that they are not communicating any thing regarding the
        >>>> package.
        >>>> I have checked the package
        >>>> windows and Ubuntu it is working fine.
        >>>>
        >>>> I unable to understand what actually the problem is ?
        >>>> And the reviewers are not communicating about the problem. Though I am
        >>>> getting lots of email from bioc-devel dealing with others package
        >>>> problem .
        >>>>
        >>>> Please suggest me what should I do now ?
        >>>>
        >>>>
        >>>>
        >>>>
        >>>> Thank you
        >>>>
        >>>>
        >>>>
        >>>> Regards
        >>>> Pijush
        >>>>
        >>>>
        >>>>
        >>>>
        >>>> On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
        >>>> Nitesh.Turaga at roswellpark.org

        <mailto:Nitesh.Turaga at roswellpark.org>> wrote:

        >>>>
        >>>> Hi,

        >>>>>
        >>>>> Please read through this documentation.
        >>>>>
        >>>>> http://bioconductor.org/developers/package-submission/

        <http://bioconductor.org/developers/package-submission/>

        >>>>>
        >>>>>
        >>>>> Nitesh
        >>>>>
        >>>>> On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com <mailto:topijush at gmail.com>> wrote:

        >>>>>>
        >>>>>> Dear Sir,
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>> I have developed an R package. I want to submit this package in
        >>>>>> Bioconductor.
        >>>>>> Please help me to submit the R package.
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>> regards
        >>>>>> Pijush Das
        >>>>>>
        >>>>>>??????? [[alternative HTML version deleted]]
        >>>>>>
        >>>>>> _______________________________________________
        >>>>>> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >>>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>>>>>

        >>>>>
        >>>>>
        >>>>>
        >>>>> This email message may contain legally privileged and/or confidential
        >>>>> information.? If you are not the intended recipient(s), or the employee
        >>>>>

        >>>> or
        >>>>

        >>>>> agent responsible for the delivery of this message to the intended
        >>>>> recipient(s), you are hereby notified that any disclosure, copying,
        >>>>> distribution, or use of this email message is prohibited.? If you have
        >>>>> received this message in error, please notify the sender immediately by
        >>>>> e-mail and delete this email message from your computer. Thank you.
        >>>>>
        >>>>>

        >>>>????????? [[alternative HTML version deleted]]
        >>>>
        >>>> _______________________________________________
        >>>> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>>>
        >>>>

        >>>
        >>>

        >>???????? [[alternative HTML version deleted]]
        >>
        >> _______________________________________________
        >> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>
        >>

        >
        > This email message may contain legally privileged and/or confidential
        > information.? If you are not the intended recipient(s), or the employee or
        > agent responsible for the delivery of this message to the intended
        > recipient(s), you are hereby notified that any disclosure, copying,
        > distribution, or use of this email message is prohibited.? If you have
        > received this message in error, please notify the sender immediately by
        > e-mail and delete this email message from your computer. Thank you.
        >

         ??????? [[alternative HTML version deleted]]

Wait for the reviewer to comment further on your package.

On 04/26/2018 02:20 AM, Pijush Das wrote:

Dear Sir,


I have found that my package sigFeature had passed all the built test
without errors or warnings
on all platforms.
What should I do next ?





regards
Pijush












On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori <
Lori.Shepherd at roswellpark.org <mailto:Lori.Shepherd at roswellpark.org>>
wrote:

    It doesn't look like the webhook was ever initialized


    Please follow the instructions here:

    https://github.com/Bioconductor/Contributions/blob/master/
CONTRIBUTING.md#adding-a-web-hook
    <https://github.com/Bioconductor/Contributions/blob/master/
CONTRIBUTING.md#adding-a-web-hook>

    After the webhook is set up you will need to do another version bump
    to trigger the build -  Please post further correspondence regarding
    your package submission on the open github issue


    https://github.com/Bioconductor/Contributions/issues/713
    <https://github.com/Bioconductor/Contributions/issues/713>


    Lori Shepherd

    Bioconductor Core Team

    Roswell Park Cancer Institute

    Department of Biostatistics & Bioinformatics

    Elm & Carlton Streets

    Buffalo, New York 14263

    ------------------------------------------------------------
------------
    *From:* Pijush Das <topijush at gmail.com <mailto:topijush at gmail.com>>
    *Sent:* Tuesday, April 24, 2018 11:33:14 AM
    *To:* Shepherd, Lori
    *Cc:* Morgan, Martin; bioc-devel at r-project.org
    <mailto:bioc-devel at r-project.org>

    *Subject:* Re: [Bioc-devel] Need some help to submit a R package.
    Dear sir,


    I have uploaded the sigFeature package ( Version: 0.99.1) in the
    existing git repository and did a version bump. The link is given
below.
    https://github.com/pijush1285/sigFeature
    <https://github.com/pijush1285/sigFeature>
      But still now I am not getting any response.
    Is there required to add the web hook again ?

    Thank you

    regards
    Pijush



    On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori
    <Lori.Shepherd at roswellpark.org
    <mailto:Lori.Shepherd at roswellpark.org>> wrote:

        We like to keep track of the changes and have the reviews in one
        place.   If possible it would be better to replace the contents
        of existing git repository and do a version bump.


        Lori Shepherd

        Bioconductor Core Team

        Roswell Park Cancer Institute

        Department of Biostatistics & Bioinformatics

        Elm & Carlton Streets

        Buffalo, New York 14263

        ------------------------------------------------------------
------------
        *From:* Bioc-devel <bioc-devel-bounces at r-project.org
        <mailto:bioc-devel-bounces at r-project.org>> on behalf of Pijush
        Das <topijush at gmail.com <mailto:topijush at gmail.com>>
        *Sent:* Tuesday, April 24, 2018 7:43:04 AM
        *To:* Morgan, Martin
        *Cc:* bioc-devel at r-project.org <mailto:bioc-devel at r-project.org>
        *Subject:* Re: [Bioc-devel] Need some help to submit a R package.
        Dear Sir,

        I have solved most of the issues raised by the reviewers.
        There were significant amount of changes in the original code.
        So should we submit our package (sigFeature) as a new submission
        or replace the contents of existing git repository with version
        increment.


        regards
        Pijush


        On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
        martin.morgan at roswellpark.org
        <mailto:martin.morgan at roswellpark.org>> wrote:

        > If you are still having problems understanding warnings, it is

probably

        > better to use the github issue -- it may take some time to get

an answer,

        > because the reviewers have many responsibilities.
        >
        > It looks like your 'webhook' is not correct, and that you are

not changing

        > the version of your package (from 0.99.0 to 0.99.1, 0.99.2,

...) when you

        > wish to generate another build report. @grimbough indicated in

the github

        > issue how to address these problems.
        >
        > Martin
        >
        >
        > On 04/16/2018 03:58 AM, Pijush Das wrote:
        >

        >> Dear  Ruqian,
        >>
        >>
        >> Yes sir, I have opened the build report which is a link to an

HTML page

        >> with details.
        >> But I unable to understand why the WARNING massages are

showing.

        >>
        >> Three days before the other reviewers had made some comments

and asked me

        >> to address
        >> those issues and also told me to solve the NOTEs produced by

BioCheck.

        >>
        >> Presently I am working on the sigFeature package to address

those issues.

        >> I shall communicate soon after solving those issues.
        >>
        >>
        >> Thank you
        >>
        >>
        >> Regards
        >> Pijush
        >>
        >>
        >>
        >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <
        >> ruqianl at student.unimelb.edu.au

        <mailto:ruqianl at student.unimelb.edu.au>>

        >> wrote:
        >>
        >> Hi Pijush,

        >>>
        >>> Did you open the build report which is a link to an HTML page

with

        >>> details
        >>> of the warning?
        >>>
        >>>
        >>> Regards,
        >>> Ruqian
        >>>
        >>>
        >>>
        >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <

topijush at gmail.com <mailto:topijush at gmail.com>> wrote:

        >>>
        >>> Dear Sir,

        >>>>
        >>>>
        >>>> I have submitted an R package named "sigFeature" in Github

and also

        >>>> Bioconductor 9 days before.
        >>>> The reviewers only said that there is some WARNING problem

in the

        >>>> package
        >>>> in different platform.
        >>>>
        >>>> But after that they are not communicating any thing

regarding the

        >>>> package.
        >>>> I have checked the package
        >>>> windows and Ubuntu it is working fine.
        >>>>
        >>>> I unable to understand what actually the problem is ?
        >>>> And the reviewers are not communicating about the problem.

Though I am

        >>>> getting lots of email from bioc-devel dealing with others

package

        >>>> problem .
        >>>>
        >>>> Please suggest me what should I do now ?
        >>>>
        >>>>
        >>>>
        >>>>
        >>>> Thank you
        >>>>
        >>>>
        >>>>
        >>>> Regards
        >>>> Pijush
        >>>>
        >>>>
        >>>>
        >>>>
        >>>> On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
        >>>> Nitesh.Turaga at roswellpark.org

        <mailto:Nitesh.Turaga at roswellpark.org>> wrote:

        >>>>
        >>>> Hi,

        >>>>>
        >>>>> Please read through this documentation.
        >>>>>
        >>>>> http://bioconductor.org/developers/package-submission/

        <http://bioconductor.org/developers/package-submission/>

        >>>>>
        >>>>>
        >>>>> Nitesh
        >>>>>
        >>>>> On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com

<mailto:topijush at gmail.com>> wrote:

        >>>>>>
        >>>>>> Dear Sir,
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>> I have developed an R package. I want to submit this

package in

        >>>>>> Bioconductor.
        >>>>>> Please help me to submit the R package.
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>> regards
        >>>>>> Pijush Das
        >>>>>>
        >>>>>>        [[alternative HTML version deleted]]
        >>>>>>
        >>>>>> _______________________________________________
        >>>>>> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >>>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>>>>>

        >>>>>
        >>>>>
        >>>>>
        >>>>> This email message may contain legally privileged and/or

confidential

        >>>>> information.  If you are not the intended recipient(s), or

the employee

        >>>>>

        >>>> or
        >>>>

        >>>>> agent responsible for the delivery of this message to the

intended

        >>>>> recipient(s), you are hereby notified that any disclosure,

copying,

        >>>>> distribution, or use of this email message is prohibited.

If you have

        >>>>> received this message in error, please notify the sender

immediately by

        >>>>> e-mail and delete this email message from your computer.

Thank you.

        >>>>>
        >>>>>

        >>>>          [[alternative HTML version deleted]]
        >>>>
        >>>> _______________________________________________
        >>>> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>>>
        >>>>

        >>>
        >>>

        >>         [[alternative HTML version deleted]]
        >>
        >> _______________________________________________
        >> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>
        >>

        >
        > This email message may contain legally privileged and/or

confidential

        > information.  If you are not the intended recipient(s), or the

employee or

        > agent responsible for the delivery of this message to the

intended

        > recipient(s), you are hereby notified that any disclosure,

copying,

        > distribution, or use of this email message is prohibited.  If

you have

        > received this message in error, please notify the sender

immediately by

        > e-mail and delete this email message from your computer. Thank

you.

        >

                 [[alternative HTML version deleted]]

This email message may contain legally privileged and/or confidential
information.  If you are not the intended recipient(s), or the employee or
agent responsible for the delivery of this message to the intended
recipient(s), you are hereby notified that any disclosure, copying,
distribution, or use of this email message is prohibited.  If you have
received this message in error, please notify the sender immediately by
e-mail and delete this email message from your computer. Thank you.

I am able to open this link.  Perhaps it was an intermittent internet
connection issue?  Are you able to open the link now?


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263
------------------------------
*From:* Pijush Das <topijush at gmail.com>
*Sent:* Friday, April 27, 2018 7:06:07 AM
*To:* Morgan, Martin
*Cc:* Shepherd, Lori; bioc-devel at r-project.org
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.

Dear Sir,


I have found some problem in github link given below:
https://github.com/Bioconductor/Contributions/issues/713
The link is not opening. Is there any problem in github repository?
Please check it.


Thank you


regards
Pijush







On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan <
martin.morgan at roswellpark.org> wrote:

Wait for the reviewer to comment further on your package.

On 04/26/2018 02:20 AM, Pijush Das wrote:

Dear Sir,


I have found that my package sigFeature had passed all the built test
without errors or warnings
on all platforms.
What should I do next ?





regards
Pijush












On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori <
Lori.Shepherd at roswellpark.org <mailto:Lori.Shepherd at roswellpark.org>>
wrote:

    It doesn't look like the webhook was ever initialized


    Please follow the instructions here:

    https://github.com/Bioconductor/Contributions/blob/master/CO
NTRIBUTING.md#adding-a-web-hook
    <https://github.com/Bioconductor/Contributions/blob/master/C
ONTRIBUTING.md#adding-a-web-hook>

    After the webhook is set up you will need to do another version bump
    to trigger the build -  Please post further correspondence regarding
    your package submission on the open github issue


    https://github.com/Bioconductor/Contributions/issues/713
    <https://github.com/Bioconductor/Contributions/issues/713>


    Lori Shepherd

    Bioconductor Core Team

    Roswell Park Cancer Institute

    Department of Biostatistics & Bioinformatics

    Elm & Carlton Streets

    Buffalo, New York 14263

    ------------------------------------------------------------
------------
    *From:* Pijush Das <topijush at gmail.com <mailto:topijush at gmail.com>>
    *Sent:* Tuesday, April 24, 2018 11:33:14 AM
    *To:* Shepherd, Lori
    *Cc:* Morgan, Martin; bioc-devel at r-project.org
    <mailto:bioc-devel at r-project.org>

    *Subject:* Re: [Bioc-devel] Need some help to submit a R package.
    Dear sir,


    I have uploaded the sigFeature package ( Version: 0.99.1) in the
    existing git repository and did a version bump. The link is given
below.
    https://github.com/pijush1285/sigFeature
    <https://github.com/pijush1285/sigFeature>
      But still now I am not getting any response.
    Is there required to add the web hook again ?

    Thank you

    regards
    Pijush



    On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori
    <Lori.Shepherd at roswellpark.org
    <mailto:Lori.Shepherd at roswellpark.org>> wrote:

        We like to keep track of the changes and have the reviews in one
        place.   If possible it would be better to replace the contents
        of existing git repository and do a version bump.


        Lori Shepherd

        Bioconductor Core Team

        Roswell Park Cancer Institute

        Department of Biostatistics & Bioinformatics

        Elm & Carlton Streets

        Buffalo, New York 14263

        ------------------------------------------------------------
------------
        *From:* Bioc-devel <bioc-devel-bounces at r-project.org
        <mailto:bioc-devel-bounces at r-project.org>> on behalf of Pijush
        Das <topijush at gmail.com <mailto:topijush at gmail.com>>
        *Sent:* Tuesday, April 24, 2018 7:43:04 AM
        *To:* Morgan, Martin
        *Cc:* bioc-devel at r-project.org <mailto:bioc-devel at r-project.org>
        *Subject:* Re: [Bioc-devel] Need some help to submit a R package.
        Dear Sir,

        I have solved most of the issues raised by the reviewers.
        There were significant amount of changes in the original code.
        So should we submit our package (sigFeature) as a new submission
        or replace the contents of existing git repository with version
        increment.


        regards
        Pijush


        On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan <
        martin.morgan at roswellpark.org
        <mailto:martin.morgan at roswellpark.org>> wrote:

        > If you are still having problems understanding warnings, it is

probably

        > better to use the github issue -- it may take some time to get

an answer,

        > because the reviewers have many responsibilities.
        >
        > It looks like your 'webhook' is not correct, and that you are

not changing

        > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, ...)

when you

        > wish to generate another build report. @grimbough indicated in

the github

        > issue how to address these problems.
        >
        > Martin
        >
        >
        > On 04/16/2018 03:58 AM, Pijush Das wrote:
        >

        >> Dear  Ruqian,
        >>
        >>
        >> Yes sir, I have opened the build report which is a link to an

HTML page

        >> with details.
        >> But I unable to understand why the WARNING massages are showing.
        >>
        >> Three days before the other reviewers had made some comments

and asked me

        >> to address
        >> those issues and also told me to solve the NOTEs produced by

BioCheck.

        >>
        >> Presently I am working on the sigFeature package to address

those issues.

        >> I shall communicate soon after solving those issues.
        >>
        >>
        >> Thank you
        >>
        >>
        >> Regards
        >> Pijush
        >>
        >>
        >>
        >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu <
        >> ruqianl at student.unimelb.edu.au

        <mailto:ruqianl at student.unimelb.edu.au>>

        >> wrote:
        >>
        >> Hi Pijush,

        >>>
        >>> Did you open the build report which is a link to an HTML page

with

        >>> details
        >>> of the warning?
        >>>
        >>>
        >>> Regards,
        >>> Ruqian
        >>>
        >>>
        >>>
        >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das <

topijush at gmail.com <mailto:topijush at gmail.com>> wrote:

        >>>
        >>> Dear Sir,

        >>>>
        >>>>
        >>>> I have submitted an R package named "sigFeature" in Github

and also

        >>>> Bioconductor 9 days before.
        >>>> The reviewers only said that there is some WARNING problem in

the

        >>>> package
        >>>> in different platform.
        >>>>
        >>>> But after that they are not communicating any thing regarding

the

        >>>> package.
        >>>> I have checked the package
        >>>> windows and Ubuntu it is working fine.
        >>>>
        >>>> I unable to understand what actually the problem is ?
        >>>> And the reviewers are not communicating about the problem.

Though I am

        >>>> getting lots of email from bioc-devel dealing with others

package

        >>>> problem .
        >>>>
        >>>> Please suggest me what should I do now ?
        >>>>
        >>>>
        >>>>
        >>>>
        >>>> Thank you
        >>>>
        >>>>
        >>>>
        >>>> Regards
        >>>> Pijush
        >>>>
        >>>>
        >>>>
        >>>>
        >>>> On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh <
        >>>> Nitesh.Turaga at roswellpark.org

        <mailto:Nitesh.Turaga at roswellpark.org>> wrote:

        >>>>
        >>>> Hi,

        >>>>>
        >>>>> Please read through this documentation.
        >>>>>
        >>>>> http://bioconductor.org/developers/package-submission/

        <http://bioconductor.org/developers/package-submission/>

        >>>>>
        >>>>>
        >>>>> Nitesh
        >>>>>
        >>>>> On Apr 2, 2018, at 2:00 AM, Pijush Das <topijush at gmail.com

<mailto:topijush at gmail.com>> wrote:

        >>>>>>
        >>>>>> Dear Sir,
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>> I have developed an R package. I want to submit this

package in

        >>>>>> Bioconductor.
        >>>>>> Please help me to submit the R package.
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>>
        >>>>>> regards
        >>>>>> Pijush Das
        >>>>>>
        >>>>>>        [[alternative HTML version deleted]]
        >>>>>>
        >>>>>> _______________________________________________
        >>>>>> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >>>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>>>>>

        >>>>>
        >>>>>
        >>>>>
        >>>>> This email message may contain legally privileged and/or

confidential

        >>>>> information.  If you are not the intended recipient(s), or

the employee

        >>>>>

        >>>> or
        >>>>

        >>>>> agent responsible for the delivery of this message to the

intended

        >>>>> recipient(s), you are hereby notified that any disclosure,

copying,

        >>>>> distribution, or use of this email message is prohibited.

If you have

        >>>>> received this message in error, please notify the sender

immediately by

        >>>>> e-mail and delete this email message from your computer.

Thank you.

        >>>>>
        >>>>>

        >>>>          [[alternative HTML version deleted]]
        >>>>
        >>>> _______________________________________________
        >>>> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>>>
        >>>>

        >>>
        >>>

        >>         [[alternative HTML version deleted]]
        >>
        >> _______________________________________________
        >> Bioc-devel at r-project.org <mailto:Bioc-devel at r-project.org>

        mailing list

        >> https://stat.ethz.ch/mailman/listinfo/bioc-devel

        <https://stat.ethz.ch/mailman/listinfo/bioc-devel>

        >>
        >>

        >
        > This email message may contain legally privileged and/or

confidential

        > information.  If you are not the intended recipient(s), or the

employee or

        > agent responsible for the delivery of this message to the

intended

        > recipient(s), you are hereby notified that any disclosure,

copying,

        > distribution, or use of this email message is prohibited.  If

you have

        > received this message in error, please notify the sender

immediately by

        > e-mail and delete this email message from your computer. Thank

you.

        >

                 [[alternative HTML version deleted]]

I am still able to open the link:

https://github.com/Bioconductor/Contributions/issues/713


Perhaps there is some firewall or ani-virus program you are running that
is blocking access?


When you try to go to the link, what message is displayed?


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263
------------------------------
*From:* Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of
Shepherd, Lori <Lori.Shepherd at RoswellPark.org>
*Sent:* Friday, April 27, 2018 8:18:23 AM
*To:* Pijush Das; Morgan, Martin
*Cc:* bioc-devel at r-project.org
*Subject:* Re: [Bioc-devel] Need some help to submit a R package.

I am able to open this link.  Perhaps it was an intermittent internet
connection issue?  Are you able to open the link now?


Lori Shepherd

Bioconductor Core Team

Roswell Park Cancer Institute

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263