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[Bioc-devel] Debugging not updated for coexnet package

5 messages · Hervé Pagès, Juan David Henao Sanchez, Shepherd, Lori

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Dear all.

I received an error regarding my package coexnet when it is checking for
multiple platforms. I already fix the problem a couple of days ago and I
push the solution like:

git push origin master

However, I continue receiving the same error message and it is the same
previous version of my package.

There is something additional I have to do to update my package?

Thanks on advance,

I look forward to hearing from you soon.

Juan
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If you followed the instructions for syncing the repository to git.bioconductor.org found here

http://bioconductor.org/developers/how-to/git/sync-existing-repositories/

you should follow the instructions for pushing to Bioconductor

http://bioconductor.org/developers/how-to/git/push-to-github-bioc/


check your remotes by doing a

git remote -v

if the bioconductor git server is upstream you would have to do

git push upstream master



Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263
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Hi Juan,
On 5/12/20 13:37, Juan David Henao Sanchez wrote:
Indeed the package is now green in Bioc devel (the master branch of your 
package):

   https://bioconductor.org/checkResults/3.12/bioc-LATEST/

However, as I mentioned in the email I sent you off list, the package is 
still broken in BioC 3.11 (the current release):

   https://bioconductor.org/checkResults/3.11/bioc-LATEST/

So you also need to fix the RELEASE_3_11 branch of your package.

Best,
H.

  
    
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Hi.

Thanks for your help solving this issue. Could you please let me know how I
can fix the bug in the specific BioC version (3.11). How could I push my
current updated code into this specific version?

Thanks in advance.

I am looking forward to hearing from you soon.

Kind regards,

Juan

El mi?., 13 may. 2020 a las 0:44, Herv? Pag?s (<hpages at fredhutch.org>)
escribi?:

  
    
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There is lots of documentation on how to achieve this.

Most specifically for pushing changes to the RELEASE_3_11 branch following the documentation

http://bioconductor.org/developers/how-to/git/bug-fix-in-release-and-devel/




Lori Shepherd

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263