[Bioc-devel] ERROR: More than one VignetteEngine specified.

Hi,

I am getting the following error when running BiocCheck
"ERROR: More than one VignetteEngine specified."

But all the vignettes have the same
%\VignetteEngine{knitr::rmarkdown}

specified.
Where else does BiocCheck look for vignetteEngine specification?



Regards
Witek

PS. the code can be found here.
https://github.com/protViz/prozor

Hi Witek,

Probably it is a false positive, caused by a commented VignetteEngine on 
https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16 
<https://github.com/protViz/prozor/blob/master/vignettes/TargetDecoyFDR_Example.Rmd#L16> 

If you delete it (and the line below to be sure) I guess it will go away.

Best,

Llu?s

On Fri, 19 Nov 2021 at 14:33, Witold Wolski <wew at fgcz.ethz.ch 
<mailto:wew at fgcz.ethz.ch>> wrote:

    Hi,

    I am getting the following error when running BiocCheck
    "ERROR: More than one VignetteEngine specified."

    But all the vignettes have the same
    %\VignetteEngine{knitr::rmarkdown}

    specified.
    Where else does BiocCheck look for vignetteEngine specification?



    Regards
    Witek

    PS. the code can be found here.
    https://github.com/protViz/prozor <https://github.com/protViz/prozor>