Hi developers, Just a heads up that last week I made a change in S4Vectors that broke findOverlaps(). The failure is a segfault that occur during calls to findOverlaps() e.g. https://bioconductor.org/checkResults/3.7/bioc-LATEST/GenomicRanges/malbec2-buildsrc.html Many packages are affected. This morning I fixed the problem in IRanges 2.13.5. This new version won't be available via biocLite() before tomorrow though. In the meantime you can grab and install it directly from git. Sorry for the inconvenience, H.
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319