[Bioc-devel] ggbio error

Hi,

I am wondering whether this is only something temporary, but given that
the new Bioc release is upcoming and packages should pass R CMD
build/check by now, I am reporting that a ggbio R CMD check error

http://bioconductor.org/checkResults/devel/bioc-LATEST/ggbio/zin2-checksrc.html

causes ReportingTools to fail:

ERROR: dependency 'ggbio' is not available for package 'ReportingTools'

and, eventually, EnrichmentBrowser to fail:

ERROR: dependency 'ReportingTools' is not available for package

'EnrichmentBrowser'

Which steps need to be undertaken here?

Thx,
Ludwig


--
Dipl.-Bioinf. Ludwig Geistlinger

Lehr- und Forschungseinheit f?r Bioinformatik
Institut f?r Informatik
Ludwig-Maximilians-Universit?t M?nchen
Amalienstrasse 17, 2. Stock, B?ro A201
80333 M?nchen

Tel.: 089-2180-4067
eMail: Ludwig.Geistlinger at bio.ifi.lmu.de

Hi,

I am wondering whether this is only something temporary, but given that
the new Bioc release is upcoming and packages should pass R CMD
build/check by now, I am reporting that a ggbio R CMD check error

http://bioconductor.org/checkResults/devel/bioc-LATEST/ggbio/zin2-checksrc.html

causes ReportingTools to fail:

ERROR: dependency ?ggbio? is not available for package ?ReportingTools?

and, eventually, EnrichmentBrowser to fail:

ERROR: dependency ?ReportingTools? is not available for package

?EnrichmentBrowser?

Which steps need to be undertaken here?

Thx,
Ludwig


--
Dipl.-Bioinf. Ludwig Geistlinger

Lehr- und Forschungseinheit f?r Bioinformatik
Institut f?r Informatik
Ludwig-Maximilians-Universit?t M?nchen
Amalienstrasse 17, 2. Stock, B?ro A201
80333 M?nchen

Tel.: 089-2180-4067
eMail: Ludwig.Geistlinger at bio.ifi.lmu.de

From: "Michael Lawrence" <lawrence.michael at gene.com>
To: "Ludwig Geistlinger" <Ludwig.Geistlinger at bio.ifi.lmu.de>
Cc: "bioc-devel" <bioc-devel at r-project.org>
Sent: Saturday, April 2, 2016 4:00:20 AM
Subject: Re: [Bioc-devel] ggbio error

I think I fixed those things since the build report was generated.

Michael

On Sat, Apr 2, 2016 at 1:48 AM, Ludwig Geistlinger
<Ludwig.Geistlinger at bio.ifi.lmu.de> wrote:

Hi,

I am wondering whether this is only something temporary, but given that
the new Bioc release is upcoming and packages should pass R CMD
build/check by now, I am reporting that a ggbio R CMD check error

http://bioconductor.org/checkResults/devel/bioc-LATEST/ggbio/zin2-checksrc.html

causes ReportingTools to fail:

ERROR: dependency ?ggbio? is not available for package ?ReportingTools?

and, eventually, EnrichmentBrowser to fail:

ERROR: dependency ?ReportingTools? is not available for package

?EnrichmentBrowser?

Which steps need to be undertaken here?

Thx,
Ludwig


--
Dipl.-Bioinf. Ludwig Geistlinger

Lehr- und Forschungseinheit f?r Bioinformatik
Institut f?r Informatik
Ludwig-Maximilians-Universit?t M?nchen
Amalienstrasse 17, 2. Stock, B?ro A201
80333 M?nchen

Tel.: 089-2180-4067
eMail: Ludwig.Geistlinger at bio.ifi.lmu.de