Dear Bioc-devel
I have obtained the following warning by building binaries in celaya2 OS
X 10.11.6 The Captain/x86_64,
in windows works fine:
** byte-compile and prepare package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in rgl.init(initValue, onlyNULL) :
RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning in rgl.init(initValue, onlyNULL) :
RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
My yaml section into vignette:
---
title: "Clustering time series data with tscR"
subtitle: "A R package to cluster time series data, base on slope and Fr?chet distance"
author:
- P?rez-Sanz, Fernando. Murcian Institute of biomedical research
- Riquelme-P?rez, Miriam. CNRS - CEA, Univ. Paris-Saclay. MIRCen
output:
prettydoc::html_pretty:
theme: hpstr
highlight: github
toc: true
vignette: >
%\VignetteIndexEntry{tscR}
%\VignetteEncoding{UTF-8}
%\VignetteEngine{knitr::rmarkdown}
editor_options:
chunk_output_type: console
---
could someone help me?
Thanks
Fernando
[Bioc-devel] Warning: 'rgl_init' failed
2 messages · Fernando Pérez Sanz, Hervé Pagès
Hi Fernando, This is a warning only and is on our side (i.e. it's an issue with how our Mac builders are set up). It can safely be ignored. Cheers, H.
On 1/7/20 23:58, Fernando P?rez Sanz wrote:
Dear Bioc-devel
I have obtained the following warning by building binaries in celaya2 OS
X 10.11.6 The Captain/x86_64,
in windows works fine:
** byte-compile and prepare package for lazy loading
Warning in rgl.init(initValue, onlyNULL) :
RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in rgl.init(initValue, onlyNULL) :
RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning in rgl.init(initValue, onlyNULL) :
RGL: GLX extension missing on server
Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
My yaml section into vignette:
---
title: "Clustering time series data with tscR"
subtitle: "A R package to cluster time series data, base on slope and Fr?chet distance"
author:
- P?rez-Sanz, Fernando. Murcian Institute of biomedical research
- Riquelme-P?rez, Miriam. CNRS - CEA, Univ. Paris-Saclay. MIRCen
output:
prettydoc::html_pretty:
theme: hpstr
highlight: github
toc: true
vignette: >
%\VignetteIndexEntry{tscR}
%\VignetteEncoding{UTF-8}
%\VignetteEngine{knitr::rmarkdown}
editor_options:
chunk_output_type: console
---
could someone help me?
Thanks
Fernando
[[alternative HTML version deleted]]
_______________________________________________ Bioc-devel at r-project.org mailing list https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwIDaQ&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=BBeIeNM9o_ctlmNKk4lUxZh0nCqo456Lk8KO1LcCY7M&s=HbWnth9FZ6dgOQX3WwBPo4NZz3yHMZj2ngmZFLNCFpU&e=
Herv? Pag?s Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: hpages at fredhutch.org Phone: (206) 667-5791 Fax: (206) 667-1319