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[Bioc-devel] bsseqData

9 messages · Kasper Daniel Hansen, Turaga, Nitesh, Peter Hickey +1 more

Original
Obenchain, Valerie
# 
I've just given you and Pete access. Please give it a try and let me know if you have problems.

Val
On 04/28/2018 10:50 AM, Kasper Daniel Hansen wrote:
Could Pete and I get write access to bsseqData?

Best,
Kasper


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Peter Hickey
# 
Thanks, Val. I'm getting an error about "too large files" when I try to
push (see below). Is there a different workflow for pushing an experiment
data package or am I doing something else wrong? bsseqData predates the svn
-> git transition.

Thanks,
Pete

$ git push origin master
Counting objects: 7, done.
Delta compression using up to 4 threads.
Compressing objects: 100% (7/7), done.
Writing objects: 100% (7/7), 66.80 MiB | 693.00 KiB/s, done.
Total 7 (delta 2), reused 0 (delta 0)
remote: Error: file larger than 5 Mb.
remote:
remote:     File name: 'data/BS.cancer.ex.fit.rda'
remote:     File size: 40.8 Mb
remote:
remote: Please see Biocondcutor guidelines
remote: https://bioconductor.org/developers/package-guidelines/
remote:
To git.bioconductor.org:packages/bsseqData.git
 ! [remote rejected] master -> master (pre-receive hook declined)
error: failed to push some refs to
'git at git.bioconductor.org:packages/bsseqData.git'


On Sat, 28 Apr 2018 at 19:17 Obenchain, Valerie <
Valerie.Obenchain at roswellpark.org> wrote:

            

      
      
      
    

        

      
      
    

        

  
  


  


      

    

    

      
      

        


  

        

      Turaga, Nitesh
    

    

      
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Hi Pete,

This should be resolved now.

Best,

Nitesh

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

        
This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.

  
  


  


      

    

    

      
      

        


  

        

      Peter Hickey
    

    

      
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Nitesh, I am still getting the "Error: file larger than 5 Mb" error.

On Sun, 29 Apr 2018 at 09:59 Turaga, Nitesh <Nitesh.Turaga at roswellpark.org>
wrote:

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

  
  


  


      

    

    

      
      

        


  

        

      Turaga, Nitesh
    

    

      
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Can you try with a fresh clone of the repo? 

Best,

Nitesh

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        
This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.

  
  


  


      

    

    

      
      

        


  

        

      Peter Hickey
    

    

      
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I'm still unable to push large files after a fresh clone. I *am* able to
push smaller changes (I just tweaked the DESCRIPTION to test this). But I
get the "Error: file larger than 5 Mb" error when I try to update larger
objects (e.g., BS.cancer.ex.fit.rda which is 40.8 Mb).

On Sun, 29 Apr 2018 at 11:43 Turaga, Nitesh <Nitesh.Turaga at roswellpark.org>
wrote:

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

  
  


  


      

    

    

      
      

        


  

        

      Obenchain, Valerie
    

    

      
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Hi guys,

I'm not sure if this got resolved. If it didn't, I'd recommend waiting until after the 3.7 branching tomorrow.

Thanks.
Val

        
On 04/29/2018 09:37 AM, Peter Hickey wrote:

        
I'm still unable to push large files after a fresh clone. I *am* able to push smaller changes (I just tweaked the DESCRIPTION to test this). But I get the "Error: file larger than 5 Mb" error when I try to update larger objects (e.g., BS.cancer.ex.fit.rda which is 40.8 Mb).

        
On Sun, 29 Apr 2018 at 11:43 Turaga, Nitesh <Nitesh.Turaga at roswellpark.org<mailto:Nitesh.Turaga at roswellpark.org>> wrote:

        
Can you try with a fresh clone of the repo?

Best,

Nitesh

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        

      
      
    

            

      
      
      
    

        
This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.



This email message may contain legally privileged and/or confidential information.  If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited.  If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.

  
  


  


      

    

    

      
      

        


  

        

      Peter Hickey
    

    

      
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Sure thing, we'll wait. Thanks, Val

On Sun., 29 Apr. 2018, 9:01 pm Obenchain, Valerie, <

        
Valerie.Obenchain at roswellpark.org> wrote: