Dear Lori and all, Some years ago there was a coverage badge, which disappeared when transitioning to git. Afterwards there were some mails about including the coverage badge on package's landing page again ( https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012417.html), but still there isn't one. As there is some interest from the core, and I don't know how to add it to the package builder: https://github.com/Bioconductor/packagebuilder. (I guess somewhere in builder.py?) I would like to contribute some lines to bring back the coverage badge: library(covr)p <- package_coverage("yourpackage", "all") # This will return the % of coverage of the package percent_coverage(tally_coverage(p)) Adding this will probably slow down the building of the new landing pages, but it shouldn't take much longer than the time used for the tests and the vignette. Hope this helps, Llu?s
[Bioc-devel] Package coverage
2 messages · Lluís Revilla, Shepherd, Lori
Thank you for these code snippets. I will look at adding the coverage badge over the next few weeks. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263
From: Bioc-devel <bioc-devel-bounces at r-project.org> on behalf of Llu?s Revilla <lluis.revilla at gmail.com>
Sent: Thursday, July 11, 2019 9:13:29 AM
To: bioc-devel
Subject: [Bioc-devel] Package coverage
Sent: Thursday, July 11, 2019 9:13:29 AM
To: bioc-devel
Subject: [Bioc-devel] Package coverage
Dear Lori and all, Some years ago there was a coverage badge, which disappeared when transitioning to git. Afterwards there were some mails about including the coverage badge on package's landing page again ( https://stat.ethz.ch/pipermail/bioc-devel/2017-November/012417.html), but still there isn't one. As there is some interest from the core, and I don't know how to add it to the package builder: https://github.com/Bioconductor/packagebuilder. (I guess somewhere in builder.py?) I would like to contribute some lines to bring back the coverage badge: library(covr)p <- package_coverage("yourpackage", "all") # This will return the % of coverage of the package percent_coverage(tally_coverage(p)) Adding this will probably slow down the building of the new landing pages, but it shouldn't take much longer than the time used for the tests and the vignette. Hope this helps, Llu?s [[alternative HTML version deleted]] _______________________________________________ Bioc-devel at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you.