I think it's a problem with igraph (a CRAN package) under the new toolchain. I was just in the process of filing a github issue with that package maintainer. Watch for it at https://github.com/igraph/igraph/issues/ . Dan ----- Original Message -----
From: "Luca De Sano" <l.desano at campus.unimib.it> To: "bioc-devel" <bioc-devel at r-project.org> Sent: Thursday, March 31, 2016 1:17:59 PM Subject: [Bioc-devel] Build fails on windows: R_igraph_make_weak_ref not available
Hi all, the build of our package TRONCO fails with this error on the Windows test machine: Error: processing vignette 'vignette.Rnw' failed with diagnostics: "R_igraph_make_weak_ref" not available for .Call() for package "igraph" Execution halted as reported in http://bioconductor.org/checkResults/devel/bioc-LATEST/TRONCO/moscato2-buildsrc.html After a rapid check I've found other packages with the same problem: http://bioconductor.org/checkResults/devel/bioc-LATEST/BiRewire/moscato2-buildsrc.html http://bioconductor.org/checkResults/devel/bioc-LATEST/cellTree/moscato2-buildsrc.html http://bioconductor.org/checkResults/devel/bioc-LATEST/clipper/moscato2-buildsrc.html ... I can't reproduce the error. Any suggestion on how to solve this? Thanks -- Luca De Sano Research Associate Department of Informatics, Systems and Communication University of Milan Bicocca Institute of Biomembranes and Bioenergetics of the Italian National Research Council (IBBE-CNR) email: l.desano at campus.unimib.it PEC: luca.desano at pec.it [[alternative HTML version deleted]]
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