more powerful iconv
Couple more thoughts about iconv,
(1) The 'embedded nul' error is thrown by mkCharLenCE, after the real
conversion is complete. The converted string exists in memory, though
not in a form that R can currently represent as a STRSXP. Hence the
error when passed to mkCharLenCE.
(2) The patch I submitted needed some PROTECTion, it's fixed in the
patch below. Also, in one place I did not alter CHAR(x) where x may be a
RAWSXP, because that's the pointer type required, the alternative is
(const char*) RAW(x). Should this alternative be used?
(3) I don't see why the iconv 'sub' argument shouldn't work with raw
objects also, but I think this means the 'sub' argument should also
accept raw objects.
(4) Suppose iconv fails. If x were a STRSXP, the result is NA_STRING.
Should failure of iconv on a RAWSXP return R_NilValue?
-Matt
Index: src/library/base/R/New-Internal.R
===================================================================
--- src/library/base/R/New-Internal.R (revision 52328)
+++ src/library/base/R/New-Internal.R (working copy)
@@ -239,7 +239,7 @@
iconv <- function(x, from = "", to = "", sub = NA, mark = TRUE)
{
- if(!is.character(x)) x <- as.character(x)
+ if(!is.character(x) && !is.raw(x)) x <- as.character(x)
.Internal(iconv(x, from, to, as.character(sub), mark))
}
Index: src/main/sysutils.c
===================================================================
--- src/main/sysutils.c (revision 52328)
+++ src/main/sysutils.c (working copy)
@@ -548,16 +548,17 @@
int mark;
const char *from, *to;
Rboolean isLatin1 = FALSE, isUTF8 = FALSE;
+ Rboolean isRawx = (TYPEOF(x) == RAWSXP);
- if(TYPEOF(x) != STRSXP)
- error(_("'x' must be a character vector"));
+ if(TYPEOF(x) != STRSXP && !isRawx)
+ error(_("'x' must be a character vector or raw"));
if(!isString(CADR(args)) || length(CADR(args)) != 1)
error(_("invalid '%s' argument"), "from");
if(!isString(CADDR(args)) || length(CADDR(args)) != 1)
error(_("invalid '%s' argument"), "to");
if(!isString(CADDDR(args)) || length(CADDDR(args)) != 1)
error(_("invalid '%s' argument"), "sub");
- if(STRING_ELT(CADDDR(args), 0) == NA_STRING) sub = NULL;
+ if(STRING_ELT(CADDDR(args), 0) == NA_STRING || isRawx) sub = NULL;
else sub = translateChar(STRING_ELT(CADDDR(args), 0));
mark = asLogical(CAD4R(args));
if(mark == NA_LOGICAL)
@@ -584,7 +585,7 @@
PROTECT(ans = duplicate(x));
R_AllocStringBuffer(0, &cbuff); /* 0 -> default */
for(i = 0; i < LENGTH(x); i++) {
- si = STRING_ELT(x, i);
+ si = isRawx ? x : STRING_ELT(x, i);
top_of_loop:
inbuf = CHAR(si); inb = LENGTH(si);
outbuf = cbuff.data; outb = cbuff.bufsize - 1;
@@ -622,7 +623,7 @@
goto next_char;
}
- if(res != -1 && inb == 0) {
+ if(res != -1 && inb == 0 && !isRawx) {
cetype_t ienc = CE_NATIVE;
nout = cbuff.bufsize - 1 - outb;
@@ -632,7 +633,13 @@
}
SET_STRING_ELT(ans, i, mkCharLenCE(cbuff.data, nout, ienc));
}
- else SET_STRING_ELT(ans, i, NA_STRING);
+ else if(!isRawx) SET_STRING_ELT(ans, i, NA_STRING);
+ else {
+ nout = cbuff.bufsize - 1 - outb;
+ UNPROTECT(1);
+ PROTECT(ans = allocVector(RAWSXP, nout));
+ memcpy(RAW(ans), cbuff.data, nout);
+ }
}
Riconv_close(obj);
R_FreeStringBuffer(&cbuff);
On Sat, 2010-06-19 at 16:53 -0400, Matt Shotwell wrote:
R community, As you may know, R's iconv doesn't work well converting to and from encodings that allow embedded nulls. For example
iconv("foo", to="UTF-16")
Error in iconv("foo", to = "UTF-16") :
embedded nul in string: '\xff\xfef\0o\0o\0'
However, I don't believe embedded nulls are at issue here, but rather
that R's iconv doesn't accept objects of type RAWSXP. The iconv
mechanism, after all, operates on encoded binary data, and not
necessarily null terminated C strings. I'd like to submit a very small
patch (12 lines w/o documentation) that allows R's iconv to operate on
raw objects, while not interfering or affecting the behavior of iconv on
character vectors. To keep this message terse, I've put additional
discussion, description of what the patch does, and examples here:
http://biostatmatt.com/archives/456
Also, here is a link to the patch file:
http://biostatmatt.com/R/R-devel-iconv-0.0.patch
If this change is adopted, I'd be happy to submit a documentation patch
also.
-Matt
Index: src/library/base/R/New-Internal.R
===================================================================
--- src/library/base/R/New-Internal.R (revision 52328)
+++ src/library/base/R/New-Internal.R (working copy)
@@ -239,7 +239,7 @@
iconv <- function(x, from = "", to = "", sub = NA, mark = TRUE)
{
- if(!is.character(x)) x <- as.character(x)
+ if(!is.character(x) && !is.raw(x)) x <- as.character(x)
.Internal(iconv(x, from, to, as.character(sub), mark))
}
Index: src/main/sysutils.c
===================================================================
--- src/main/sysutils.c (revision 52328)
+++ src/main/sysutils.c (working copy)
@@ -548,16 +548,17 @@
int mark;
const char *from, *to;
Rboolean isLatin1 = FALSE, isUTF8 = FALSE;
+ Rboolean isRawx = (TYPEOF(x) == RAWSXP);
- if(TYPEOF(x) != STRSXP)
- error(_("'x' must be a character vector"));
+ if(TYPEOF(x) != STRSXP && !isRawx)
+ error(_("'x' must be a character vector or raw"));
if(!isString(CADR(args)) || length(CADR(args)) != 1)
error(_("invalid '%s' argument"), "from");
if(!isString(CADDR(args)) || length(CADDR(args)) != 1)
error(_("invalid '%s' argument"), "to");
if(!isString(CADDDR(args)) || length(CADDDR(args)) != 1)
error(_("invalid '%s' argument"), "sub");
- if(STRING_ELT(CADDDR(args), 0) == NA_STRING) sub = NULL;
+ if(STRING_ELT(CADDDR(args), 0) == NA_STRING || isRawx) sub = NULL;
else sub = translateChar(STRING_ELT(CADDDR(args), 0));
mark = asLogical(CAD4R(args));
if(mark == NA_LOGICAL)
@@ -584,7 +585,7 @@
PROTECT(ans = duplicate(x));
R_AllocStringBuffer(0, &cbuff); /* 0 -> default */
for(i = 0; i < LENGTH(x); i++) {
- si = STRING_ELT(x, i);
+ si = isRawx ? x : STRING_ELT(x, i);
top_of_loop:
inbuf = CHAR(si); inb = LENGTH(si);
outbuf = cbuff.data; outb = cbuff.bufsize - 1;
@@ -622,7 +623,7 @@
goto next_char;
}
- if(res != -1 && inb == 0) {
+ if(res != -1 && inb == 0 && !isRawx) {
cetype_t ienc = CE_NATIVE;
nout = cbuff.bufsize - 1 - outb;
@@ -632,7 +633,12 @@
}
SET_STRING_ELT(ans, i, mkCharLenCE(cbuff.data, nout, ienc));
}
- else SET_STRING_ELT(ans, i, NA_STRING);
+ else if(!isRawx) SET_STRING_ELT(ans, i, NA_STRING);
+ else {
+ nout = cbuff.bufsize - 1 - outb;
+ ans = allocVector(RAWSXP, nout);
+ memcpy(RAW(ans), cbuff.data, nout);
+ }
}
Riconv_close(obj);
R_FreeStringBuffer(&cbuff);
Matthew S. Shotwell Graduate Student Division of Biostatistics and Epidemiology Medical University of South Carolina http://biostatmatt.com