AIX 5.3 --enable-R-shlib --with-x ---with-iconv make error with R-2.7.0 and R-2.7.1

Thu, Jul 17, 2008 8:38 AM

Thank you, Ei-ji.

I haven't tried the aix_R-2.7.1_Rshlib_include_configure.patch for two reason:
#1 I have to compile R2.7.0 although I can reproduce the trouble on R-2.7.1.
#2 Actually, I don't know how to use this patch to R-2.7.1. Does this
need AIX admin permission?

And thanks for telling me the pacthed R-2.7.1.aix080701.tar.gz, I will
try this and let you know the result. BTW: do we also have a patched
R-2.7.0?

I will also try to export OBJECT_MODE=64 before configuring without
--with-libiconv-prefix and remove JAVA path from PATH of when
compiling R.

In a word, thank you very much for taking care of this.

Regards,
Long

On Thu, Jul 17, 2008 at 11:12 PM, Ei-ji Nakama <nakama at ki.rim.or.jp> wrote:

Hi, sorry buggy English.

Did you cook this patch?
http://prs.ism.ac.jp/~nakama/AIX/aix_R-2.7.1_Rshlib_include_configure.patch

However, cooking of this patch is bad on AIX.
Therefore I put the thing which was finished with cooking.

http://prs.ism.ac.jp/~nakama/AIX/R-2.7.1.aix080701.tar.gz

I do a wish of tasting to you.

2008/7/17 F??n L??ng <foylong at gmail.com>:

----------------------------------------------------------
./configure \
          CC="xlc_r -q64" \
          CFLAGS="-O -qstrict" \
          CXX="xlC_r -q64" \
          CXXFLAGS="-O -qstrict" \
          F77="xlf_r -q64" \
          AR="ar -X64" \
          CPPFLAGS="-I/my_libiconv_dir/include -I/usr/lpp/X11/include/X11" \
          LDFLAGS="-L/my_libiconv_dir/lib -L/usr/lib -L/usr/X11R6/lib
-L/my_buildR_dir/R-2.7.0/lib" \
          --prefix=/my_R_dir \
          --enable-R-shlib \
          --enable-BLAS-shlib \
          --with-x \
          --with-readline=no \
          --with-libiconv-prefix="/my_libiconv_dir"

``export OBJECT_MODE=64'' had better set it.
--with-libiconv-prefix are not reflected.

 Options enabled:           shared BLAS, R profiling, Java

libjpeg and libjpeg-6b of java do conflict in my environment.
I remove PATH of the JAVA at the time of the construction.

You see the symbols d1mach, interv, TYPEOF, R_CHAR and Rf_isString,
were not found. As for the library dependence, I add
/my_libiconv_dir/lib to my LIBPATH to make sure libR.so etc. can find
the libiconv. Thus, stats.so and tools.so could have be loaded. I
don't know where I made a mistake. After looking up the R manual and
diving into Google for help, I've got no usable answer.

I had the sense that GC of ld turned into recently.
Probably former specifications may be bugs.

Below environment variables may associated:
LIBPATH="/my_libiconv_dir/lib:.:/rnd/homes/my/rdir/AIX/R-2.7.0/lib/R/lib:.:/usr/lib:/lib"

    <snip>

R_HOME="/rnd/homes/my/rdir/AIX/R-2.7.0"

Because R add it in a shell of ``bin/R'', let's add LIBPATH when it
was said that there is not it.

best,
--
EI-JI Nakama <nakama (a) ki.rim.or.jp>
"\u4e2d\u9593\u6804\u6cbb" <nakama (a) ki.rim.or.jp>

?????????x??????????????

AIX 5.3 --enable-R-shlib --with-x ---with-iconv make error with R-2.7.0 and R-2.7.1

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