plot.ranef.lme (PR#2986)
On Monday 12 May 2003 11:14 am, p.dalgaard@biostat.ku.dk wrote:
library(nlme)
data(Phenobarb)
na.include <- function(x)x
phe1 <- nlme(conc~phenoModel(Subject, time, dose, lCl, lV),
data = Phenobarb,
fixed = lCl+lV~1,
random= pdDiag(lCl+lV~1),
start = c(-5,0),
na.action = na.include,
naPattern = ~!is.na(conc))
phe.ranef <- ranef(phe1,augFrame=TRUE)
plot(phe.ranef, form=lCl~Wt+ApgarInd)
[Error in max(length(x0), length(x1), length(y0), length(y1)) :
Argument "x0" is missing, with no default]
The cause is plain to see: in plot.ranef.lme we have
staple.ends <- list(x1 = c(rep(X - w, 2), rep(X +
w, 2)), y1 = rep(c(Y[5], max(Y[1] - e.u, Y[2])),
2), x2 = c(rep(X - w, 2), rep(X + w, 2)), y2 =
rep(c(min(Y[5] + e.l, Y[4]), Y[1]), 2)) . . . .
do.call("lsegments", c(staple.ends, box.umbrella))
but lsegments expects arguments named x0,y0,x1,y1 not x1,y1,x2,y2
I have seen this problem before and I remember fixing lsegments to work with both forms of the arguments. But the CVS doesn't have the fix, so I guess I made it somewhere temporarily and forgot to add it to CVS, sorry. I'll fix this for the next release. Deepayan