Matrix inner product crashes on x86_64 (PR#8715)
On Mon, 27 Mar 2006, Prof Brian Ripley wrote:
Not reproducible for me (and do you really think that something as simple as this would not have been found on x86_64 long before now?) This is almost certainly caused by your use of an inappropriate external BLAS. Something has probably been compiled for a different processor than the one you are using, since illegal instructions are a compiler (not R) issue that I have seen quite often on ix86 systems when this happened. Use --without-blas when recompiling R and see if it then works.
Thank you for the prompt reply. Disabling the external BLAS fixed the problem as you suspected. (As a minor curiosity, the problem was not caught by any tests ran by make check or make check-all -- but I do not presume here to speculate or guess whether the tests try out any such matrix calculations or not.). :) Thanks again, J.
On Mon, 27 Mar 2006, jtlindgr at cs.helsinki.fi wrote:
Matrix inner product seems to crash R2.2.1 on a 64bit arch. More precisely, the crash happens atleast if the matrix is non-square. The bug can be reproduced (atleast here) with bash$ bin/R
X<-matrix(data=0,nrow=100,ncol=10); mat<-X%*%t(X);
Illegal instruction bash$ The crash doesnt happen if the matrix is specified square, e.g. 10x10. The underlying OS was Linux version 2.6.12-xeon-csl3 (root at chuck) (gcc version 3.4.5 20050809 (prerelease) (Ubuntu 3.4.4-6ubuntu8)) #1 SMP Wed Feb 22 18:34:17 EET 2006 and its running on Intel(R) Xeon(TM) MP CPU 3.66GHz. I configured R from the source tar.gz myself; each phase of "./configure --with-x=no ; make ; make install" passed without aborting on any errors. Cheers, J. --please do not edit the information below-- Version: platform = x86_64-unknown-linux-gnu arch = x86_64 os = linux-gnu system = x86_64, linux-gnu status = major = 2 minor = 2.1 year = 2005 month = 12 day = 20 svn rev = 36812 language = R Locale: LC_CTYPE=fi_FI at euro;LC_NUMERIC=C;LC_TIME=en_US.ISO-8859-15;LC_COLLATE=en_US.IS O-8859-15;LC_MONETARY=fi_FI at euro;LC_MESSAGES=en_US.ISO-8859-15;LC_PAPER=C;LC_N AME=C;LC_ADDRESS=C;LC_TELEPHONE=C;LC_MEASUREMENT=C;LC_IDENTIFICATION=C Search Path: .GlobalEnv, package:methods, package:stats, package:graphics, package:grDevices, package:utils, package:datasets, Autoloads, package:base
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