Issue with data() function
I found an issue with the data() command this evening when working on the survival package.
1. I have a lot of data sets in the package, almost all used in at least one vignette,
help file, or test.? As a space saving measure, I have bundled many of them together,
i.e., the file data/cancer.rda contains 19 data sets, many of them small. The resulting
file (using xz compression) is quite a bit smaller than the individual ones.? (I still get
a warning note about size from R CMD check, but I'm no longer 2x the limit.)
2. Consider the lung data set.? All of these fail:
?? data(lung)
?? data("lung")
?? data(lung, package="survival")
?a. The lung.Rd file had \usage{data(lung)}; that error was not caught by R CMD check.?
(Several other .Rd files as well.)
?b. In broader examples for teaching, I sometimes load data from other packages, e.g
data(aidssi, package="mstate").? But this does not work for survival.? (The larger
survival data sets that are in separate .rda files can be found.)
?c. What does work is survival::lung.? Might it be useful to add a comment to data.Rd to
this effect?
3. Creating a separate package 'survivaldata' is of course one route, and is suggested in
the "Writing R Extensions" guide.? But this is not possible since survival is a
recommended package: it can't load any non-recommended package for it's tests or
vignettes.? Longer term, perhaps there is way around this constraint?
Terry T.
Terry M Therneau, PhD Department of Health Science Research Mayo Clinic therneau at mayo.edu "TERR-ree THUR-noh" [[alternative HTML version deleted]]