R 1.7.0 installation problem: make check fails when using --with-lapack option
On Thu, Apr 17, 2003 at 02:07:19PM -0500, Douglas Bates wrote:
export CC=gcc-3.1 CXX=g++-3.1 ./configure --prefix=/mnt/local/R/R-1.7.0-gcc-3.1.1 --enable-R-profiling=yes --enable-R-shlib=yes --with-f77 --with-blas=yes --with-lapack=yes --with-readline=yes --with-tcltk=/usr/include/tcl8.3 --with-tcl-config=/usr/lib/tcl8.3/tclConfig.sh --with-tk-config=/usr/lib/tk8.3/tkConfig.sh --enable-shared --with-pic --with-x --with-gnome --with-gnome-includes=/usr/include/gnome-1.0 --with-recommended-packages --with-aqua=yes --with-libpng=yes --with-jpeglib=yes --with-zlib=yes --with-bzlib=yes --with-pcre=yes --with-libglade-config=/usr/bin/libglade-config configure output: R is now configured for i686-pc-linux-gnu Source directory: . Installation directory: /mnt/local/R/R-1.7.0-gcc-3.1.1 C compiler: gcc-3.1 -D__NO_MATH_INLINES -mieee-fp -g -O2 C++ compiler: g++-3.1 -mieee-fp -g -O2 Fortran compiler: g77 -mieee-fp -g -O2
This looks like you're mixing 3.1 for gcc/g++ and the default (2.95 ?) for g77. Probably risky.
Interfaces supported: X11, gnome, tcltk External libraries: readline, BLAS(ATLAS), LAPACK(generic)
That mixes Atlas blas with normal lapack. Probably ok, but not a combination we tried explicitly.
Additional capabilities: PNG, JPEG, bzip2, PCRE Options enabled: shared library, R profiling Recommended packages: no
Very peculiar. I just checked the machine where I compiled the R-1.7.0 Debian packages for the stable distribution. During the Debian package build we do run 'make check' and that succeeded on that machine. Now I get the peculiar situation that, with h9 the 9x9 Hilbert matrix, I can successfully run svd(h9) svd(h9, nu = 0) svd(h9, nv = 0) but svd(h9, nu = 0, nv = 0) fails with the error that you quote.
Uggh. My apologies for replying too soon earlier. Dirk
I compiled these packages with g77-3.0 for the Fortran compiler. Are there known problems with that? On another machine running Debian testing and using the gcc-3.2 compiler suite the tests pass.
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