R_PROFILE_USER

On Sat, Dec 5, 2015, 9:39 PM peter dalgaard <pdalgd at gmail.com> wrote:

On 05 Dec 2015, at 18:07 , arnaud gaboury <arnaud.gaboury at gmail.com>
wrote:

In my shell environment, I have set a path to R_PROFILE_USER. The
file, Rprofile.R, is a collection of small hacks.

I want to build rstudio-server from source. Best is to $ unset
R_PROFILE_USER before. Unfortunately, this has no effect on my system.

-----------------------------------------------
poisonivy at poppy ?? ~ % R

*** Successfully loaded .Rprofile ***

Welcome back poisonivy
working directory is: /home/poisonivy
poisonivy at poppy [R]
-------------------------------------

As you can see, R is still behaving like the profile is used. What is
annoying, is that Cmake will at one point not find my LibR. Error
message: missing LIBR_LIBRARIES). The Cmake command is this one:

-----------------------------------------
% R --slave --no-save -e "cat(R.home('lib'))"

*** Successfully loaded .Rprofile ***

/usr/lib64/R/libGoodbye poisonivy Sat Dec  5 18:03:06 2015
----------------------------------------------

and as you can see, the result is polluated by my profile. I can't
edit Cmake file to add "--vanilla" as they are generated each time I
start cmake.

Even deleting my Rprofile.R file, the environment still persists. I
have no idea why this behavior.

Any hints why I can't unset my profile user ?

Umm, it said that it loaded .Rprofile, not Rprofile.R. Any chance that you
have similar code in two places? (~/.Rprofile and ./.Rprofile being the most
obvious suspects).

That is my first thought. As for the file, I made a typo in my post. It is
indeed Rprofile.r ( r lower case). That could explain the welcome message.

-pd

Thank you.
--

google.com/+arnaudgabourygabx

--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Email: pd.mes at cbs.dk  Priv: PDalgd at gmail.com