R 2.6.0 make check fails on SGI origin 350 and
Hello Prof Brian Ripley and list There is no "d-p-q-r-tests.Rout" file, the following files do exists and are being sent as attachments: ./tests/d-p-q-r-tests.R , ./tests/d-p-q-r-tests.Rout.save , ./tests/d- p-q-r-tests.Rout.fail . Cheers, Kamil Kamil Marcinkowski Westgrid System Administrator kamil at ualberta.ca University of Alberta site Tel.780 492-0354 Research Computing Support Fax.780 492-1729 Academic ICT Edmonton, Alberta, CANADA University of Alberta "This communication is intended for the use of the recipient to which it is addressed, and may contain confidential, personal, and/or privileged information. Please contact us immediately if you are not the intended recipient of this communication. If you are not the intended recipient of this communication, do not copy, distribute, or take action on it. Any communication received in error, or subsequent reply, should be deleted or destroyed."
On 6-Nov-07, at 4:46 PM, Prof Brian Ripley wrote:
We need to see the d-p-q-r-tests.Rout file, and perhaps ask for some more runs (unfortunately that line number is after massaging). Can you make it available to us? Or at least a portion containing the quoted line (which should only occur once)? On Tue, 6 Nov 2007, kamil Marcinkowski wrote:
Hello I am trying to install R 2.6.0 on a SGI Origin 350 running IRIX 6.5 6.5.28f R was configured with the following options:
--x-includes=/usr/include/X11 --x-libraries=/usr/lib/X11 --includedir=/usr/freeware/include --includedir=/usr/freeware/lib32 --includedir=/usr/freeware/lib64 --with-readline=no --with-iconv=no CC=cc
gmake complied successfully, however gmake check failed on d-p-q-r- tests.R .
running code in 'd-p-q-r-tests.R' ... OK comparing 'd-p-q-r-tests.Rout' to './d-p-q-r-tests.Rout.save' ... 959c959 < [1] "Mean scaled difference: NaN" ---
[1] TRUE
gmake[3]: *** [d-p-q-r-tests.Rout] Error 1 gmake[3]: Leaving directory `/usr/global/R-build/R-2.6.0/tests' gmake[2]: *** [test-Specific] Error 2 gmake[2]: Leaving directory `/usr/global/R-build/R-2.6.0/tests' gmake[1]: *** [test-all-basics] Error 1 gmake[1]: Leaving directory `/usr/global/R-build/R-2.6.0/tests' gmake: *** [check] Error 2
Any ideas would be appreciated. Cheers, Kamil Kamil Marcinkowski Westgrid System Administrator kamil at ualberta.ca University of Alberta site Tel.780 492-0354 Research Computing Support Fax.780 492-1729 Academic ICT Edmonton, Alberta, CANADA University of Alberta "This communication is intended for the use of the recipient to which it is addressed, and may contain confidential, personal, and/or privileged information. Please contact us immediately if you are not the intended recipient of this communication. If you are not the intended recipient of this communication, do not copy, distribute, or take action on it. Any communication received in error, or subsequent reply, should be deleted or destroyed." [[alternative HTML version deleted]]
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-- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595