Error generated by .Internal(nchar) disappears when debugging
I can reproduce the problem by running R-3.2.0 (on Windows), installing copula from CRAN, and then using it:
install.packages("copula")
Installing package into 'C:/Program Files/R/R-3.2.0/site-library' (as 'lib' is unspecified) also installing the dependencies 'gsl', 'ADGofTest', 'pspline' Warning: unable to access index for repository http://bioconductor.org/packages/2.12/data/annotation/bin/windows/contrib/3.2 Warning: unable to access index for repository http://bioconductor.org/packages/2.12/data/experiment/bin/windows/contrib/3.2 trying URL 'http://cran.rstudio.com/bin/windows/contrib/3.2/gsl_1.9-10.zip' Content type 'application/zip' length 1121688 bytes (1.1 MB) downloaded 1.1 MB trying URL 'http://cran.rstudio.com/bin/windows/contrib/3.2/ADGofTest_0.3.zip' Content type 'application/zip' length 13378 bytes (13 KB) downloaded 13 KB trying URL 'http://cran.rstudio.com/bin/windows/contrib/3.2/pspline_1.0-17.zip' Content type 'application/zip' length 58343 bytes (56 KB) downloaded 56 KB trying URL 'http://cran.rstudio.com/bin/windows/contrib/3.2/copula_0.999-13.zip' Content type 'application/zip' length 3792158 bytes (3.6 MB) downloaded 3.6 MB package 'gsl' successfully unpacked and MD5 sums checked package 'ADGofTest' successfully unpacked and MD5 sums checked package 'pspline' successfully unpacked and MD5 sums checked package 'copula' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\wdunlap\AppData\Local\Temp\RtmpeurJX7\downloaded_packages
library(copula)
Warning message: package 'copula' was built under R version 3.2.2
fgmCopula(0.8)
Error in substr(sc[i], 2, nchar(sc[i]) - 1) : 4 arguments passed to .Internal(nchar) which requires 3 Bill Dunlap TIBCO Software wdunlap tibco.com
On Mon, Oct 5, 2015 at 4:57 PM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote:
On 05/10/2015 7:24 PM, Matt Dowle wrote:
Joris Meys <jorismeys <at> gmail.com> writes:
Hi all, I have a puzzling problem related to nchar. In R 3.2.1, the internal
nchar
gained an extra argument (see https://stat.ethz.ch/pipermail/r-announce/2015/000586.html) I've been testing code using the package copula, and at home I'm still running R 3.2.0 (I know, I know...). When trying the following code, I
got
an error:
library(copula) fgmCopula(0.8)
Error in substr(sc[i], 2, nchar(sc[i]) - 1) : 4 arguments passed to .Internal(nchar) which requires 3 Cheers Joris
I'm seeing a similar problem. IIUC, the Windows binary .zip from CRAN of any package using base::nchar is affected. Could someone check my answer here is correct please : http://stackoverflow.com/a/32959306/403310
Nobody has posted a simple reproducible example here, so it's kind of hard to say. I would have guessed that a change to the internal signature of the C code underlying nchar() wouldn't have any effect on a package that called the R nchar() function. When I put together my own example (a tiny package containing a function calling nchar(), built to .zip using R 3.2.2, installed into R 3.2.0), it confirmed my guess. On the other hand, if some package is calling the .Internal function directly, I'd expect that to break. Packages shouldn't do that. So I'd say there's been no evidence posted of a problem in R here, though there may be problems in some of the packages involved. I'd welcome an example that provided some usable evidence. Duncan Murdoch
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