makeconf issue on R-devel 2006-03-12 r37524
For what it is worth, I've just installed R-alpha Version 2.3.0 alpha (2006-04-07 r37668) on my G5 and encountered the same problem reported below. The same treatment got things going again. If this reflects some idiosyncrasy in my setup, my apologies.... url: www.econ.uiuc.edu/~roger Roger Koenker email rkoenker at uiuc.edu Department of Economics vox: 217-333-4558 University of Illinois fax: 217-244-6678 Champaign, IL 61820
On Mar 14, 2006, at 1:31 PM, Prof Brian Ripley wrote:
On Tue, 14 Mar 2006, roger koenker wrote:
I sent the message below to r-sig-mac yesterday, but having no reply I decided to explore a bit myself and found that editing: /Library/Frameworks/R.framework/Versions/2.3/Resources/share/make/ shlib.mk yzzy: diff shlib.mk shlib.mk~ 3c3 < include $(R_HOME)/etc/Makeconf ---
include $(R_HOME)/etc${R_ARCH}/Makeconf
restored the functionality of R CMD INSTALL. Is this a known issue?
No, and the change will break things which currently work correctly.
Looks like this is something specific to how Macs install under the
bin/exec directory. It likely stems from the following line in
INSTALL.
archs=`(cd ${R_HOME}/bin/exec; ls)`
which on other systems will only contain directories for sub-
architectures or the R or Rgnome executables, since it says
** arch - Frameworks
url: www.econ.uiuc.edu/~roger Roger Koenker email rkoenker at uiuc.edu Department of Economics vox: 217-333-4558 University of Illinois fax: 217-244-6678 Champaign, IL 61820 Begin forwarded message:
From: roger koenker <rkoenker at uiuc.edu> Date: March 13, 2006 4:46:30 PM CST To: r-sig-mac at stat.math.ethz.ch Subject: makeconf issue on R-devel 2006-03-12 r37524 I've just installed R-devel Version 2.3.0 Under development (unstable) (2006-03-12 r37524) on a G5 and things went smoothly despite my gfortran configuration, (that is ./configure, make, make install was fine), but now trying to install a source package I get: yzzy: R CMD check kuantile * checking for working latex ... OK * using log directory '/Users/roger/Projects/kuantile/ kuantile.Rcheck' * using Version 2.3.0 Under development (unstable) (2006-03-12 r37524) * checking for file 'kuantile/DESCRIPTION' ... OK * this is package 'kuantile' version '1.00' * checking package dependencies ... OK * checking if this is a source package ... WARNING Subdirectory 'kuantile/src' contains object files. * checking whether package 'kuantile' can be installed ... ERROR Installation failed. See '/Users/roger/Projects/kuantile/kuantile.Rcheck/00install.out' for details. yzzy: more /Users/roger/Projects/kuantile/kuantile.Rcheck/ 00install.out * Installing *source* package 'kuantile' ... ** libs ** arch - Frameworks /Library/Frameworks/R.framework/Resources/share/make/shlib.mk:3: / Library/Frameworks/R.fra mework/Resources/etc/Frameworks/Makeconf: No such file or directory make: *** No rule to make target `/Library/Frameworks/R.framework/ Resources/etc/Frameworks /Makeconf'. Stop. chmod: /Users/roger/Projects/kuantile/kuantile.Rcheck/kuantile/libs/ Frameworks/*: No such file or directory gfortran -fPIC -fno-common -g -O2 -c dsel05.f -o dsel05.o gfortran -fPIC -fno-common -g -O2 -c kuantile.f -o kuantile.o gcc -flat_namespace -bundle -undefined suppress -L/sw/lib -L/usr/ local/lib -o kuantile.so dsel05.o kuantile.o -L/usr/local/lib/gcc/powerpc-apple- darwin8/4.0.0 -L/usr/local/lib/gcc -lgfortran -lgcc_s -lSystemStubs -lmx -lSystem -F/Library/ Frameworks/R.framework/.. -fram ework R ERROR: compilation failed for package 'kuantile' ** Removing '/Users/roger/Projects/kuantile/kuantile.Rcheck/ kuantile' isn't there something fishy with the specification of the Makeconf file in ..../etc/Frameworks??? Roger url: www.econ.uiuc.edu/~roger Roger Koenker email rkoenker at uiuc.edu Department of Economics vox: 217-333-4558 University of Illinois fax: 217-244-6678 Champaign, IL 61820
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-- Brian D. Ripley, ripley at stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595