Segmentation faults on SEXP conversion

On Sun, Nov 15, 2009 at 2:52 PM, Duncan Murdoch - murdoch at stats.uwo.ca
<+nabble+miller_2555+1412c7fca2.murdoch#stats.uwo.ca at spamgourmet.com>
wrote:
On 15/11/2009 1:41 PM, nabble.30.miller_2555 at spamgourmet.com wrote:
The "character" type in R corresponds to STRSXP in C, which is a vector of
CHARSXPs.  So you need an extra step to get to the C string:

const char * omsg = CHAR(STRING_ELT(msg, 0));

Duncan Murdoch

Thank you for the suggestion. I have replaced the code as suggested,
but I had attempted this conversion earlier. Unfortunately, I still
receive the same segmentation fault (and backtrace). The underlying
problem no longer appears to relate to type conversion. The following
code represents the entirety of the extension's R and C code (and
NAMESPACE file), and still causes the segmentation fault:

NAMESPACE:
---------------------------------------------------
useDynLib("tstlib")
export( "ptest" )

ptest.R:
---------------------------------------------------
ptest <- function()  { .Call("Rwrite", PACKAGE="tstlib");};

ptest.c:
---------------------------------------------------
#include <R.h>
void Rwrite() { printf("[%i] %s",12,"Hi"); }

ptest.R:
---------------------------------------------------
ptest <- function()  { .Call("Rwrite", PACKAGE="tstlib");};

zzz.R:
---------------------------------------------------
.onLoad <- function(libname, pkgname)
{
}
.onUnload <- function(libpath) {
    library.dynam.unload("forkex", libpath)
  }

This is just about the most simple example I can think of, and don't
really know why it would segfault (if I change the interface in
ptest.R above from .Call to .C, no segfault occurs).
And that is your clue.

C routines that are invoked via .Call() _must_
return a SEXP object. Your routine (Rwrite)
has a return type of void.  Since you use .Call(),
takes the return value from the stack and it is garbage.
Seg fault ensues.

Declare your Rwrite() routine to return a SEXP
and have it return the symbol R_NilValue, i.e.

 SEXP Rwrite() { printf("[%i] %s",12,"Hi"); return(R_NilValue); }

and you can use .Call()

  D.

 D.
The following is
the output from `R CMD SHLIB ptest.c`:

gcc -m64 -std=gnu99 -I/usr/include/R  -I/usr/local/include    -fpic
-O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
-fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c
ptest.c -o ptest.o
gcc -m64 -std=gnu99 -shared -L/usr/local/lib64 -o ptest.so ./ptest.o
-L/usr/lib64/R/lib -lR

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Segmentation faults on SEXP conversion

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