Bump, in case it was missed. This is also the case with R Under development (unstable) (2012-05-25 r59443). /Henrik
On Fri, Apr 20, 2012 at 2:00 PM, Henrik Bengtsson <hb at biostat.ucsf.edu> wrote:
Hi,
in help("R_GSCMD") it says "R_GSCMD: Optional. The path to
Ghostscript, used by dev2bitmap, bitmap and embedFonts. Consulted when
those functions are invoked.". ?However, if 'R_GSCMD' contains a full
pathname to the Ghostscript executable (as above "path" indicates),
e.g.
Sys.getenv("R_GSCMD")
[1] "C:\\Program Files\\gs\\gs8.71\\bin\\gswin32c.exe" then 'R CMD check' will report * checking sizes of PDF files under 'inst/doc' ... NOTE Unable to find GhostScript executable to run checks on size reduction Setting 'R_GSCMD' to "gswin32c.exe" and asserting that it is the PATH (this is on Windows), it works. TROUBLESHOOTING: In the local function check_doc_size() of tools:::.check_packages() [cf. http://svn.r-project.org/R/trunk/src/library/tools/R/check.R], the Ghostscript executable is retrieved as: ?gs_cmd <- find_gs_cmd(Sys.getenv("R_GSCMD", "")) and if nzchar(gs_cmd) is FALSE, then the 'R CMD check' NOTE appears. Inspecting tools:::find_gs_cmd, this corresponds to ?gs_cmd <- Sys.which(Sys.getenv("R_GSCMD", "")) iff 'R_GSCMD' is set. ?In other words, tools:::find_gs_cmd() assumes a basename not a full pathname. SUGGESTIONS: Update tools:::find_gs_cmd() to test for file existence before turning to Sys.which(), e.g. find_gs_cmd <- function (gs_cmd) { ? ?if (!nzchar(gs_cmd)) { ? ? ? ?if (.Platform$OS.type == "windows") { ? ? ? ? ? ?gs_cmd <- Sys.which("gswin64c") ? ? ? ? ? ?if (!nzchar(gs_cmd)) ? ? ? ? ? ? ? ?gs_cmd <- Sys.which("gswin32c") ? ? ? ? ? ?gs_cmd ? ? ? ?} ? ? ? ?else Sys.which("gs") ? ?} else { ? ? ?if (file.exists(gs_cmd) && !file.info(gs_cmd)$isdir) ? ? ? ?gs_cmd ? ? ?else ? ? ? ?Sys.which(gs_cmd) ? } } /Henrik
sessionInfo()
R version 2.15.0 Patched (2012-04-08 r58935) Platform: x86_64-pc-mingw32/x64 (64-bit) locale: [1] LC_COLLATE=English_United States.1252 [2] LC_CTYPE=English_United States.1252 [3] LC_MONETARY=English_United States.1252 [4] LC_NUMERIC=C [5] LC_TIME=English_United States.1252 attached base packages: [1] stats ? ? graphics ?grDevices utils ? ? datasets ?methods ? base loaded via a namespace (and not attached): [1] R.methodsS3_1.4.0 tools_2.15.0