For a new release of survival, I normally run? R CMD check for every one of the packages that depend on survival? (forewarned is forearmed). I updated R-devel on the test machine this morning, and R CMD check --as-cran survival_3.0-9.tar.gz works as desired. When I run the check routine on any other source file, however, downloaded from CRAN, it fails nearly immediately with a message like the following. * installing *source* package ?addhazard? ... ** package ?addhazard? successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ==5550==ASan runtime does not come first in initial library list; you should eit her link runtime to your application or manually preload it with LD_PRELOAD. ERROR: lazy loading failed for package ?addhazard? * ------------------- Here is my Makevars file.? (The commented out lines are from an earlier date when I did use ASAN to find a memory leak.) CFLAGS=? -g -O2 -Wall -pedantic -mtune=native # Use the lines below for ASAN code #CC= gcc -std=gnu99 -fsanitize=address -fno-omit-frame-pointer #CFLAGS=? -fno-omit-frame-pointer -g -O2 -Wall -pedantic -mtune=native #CXX = g++ -fsanitize=address -fno-omit-frame-pointer ------- Any hints??? If all packages failed I would figure I had a global mistake, but why most? Terry T. > sessionInfo() R Under development (unstable) (2019-08-23 r77061) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Ubuntu 18.04.3 LTS Matrix products: default BLAS:?? /usr/local/src/R-devel/lib/libRblas.so LAPACK: /usr/local/src/R-devel/lib/libRlapack.so locale: ?[1] LC_CTYPE=en_US.UTF-8?????? LC_NUMERIC=C ?[3] LC_TIME=en_US.UTF-8??????? LC_COLLATE=C ?[5] LC_MONETARY=en_US.UTF-8??? LC_MESSAGES=en_US.UTF-8 ?[7] LC_PAPER=en_US.UTF-8?????? LC_NAME=C ?[9] LC_ADDRESS=C?????????????? LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats???? graphics? grDevices utils???? datasets? methods base loaded via a namespace (and not attached): [1] compiler_3.7.0
problem with R CMD check
1 message · Terry Therneau