The primary error seems to be:
"Creating a new generic function for "diff" in "spam"
Error in setGeneric(f, where = where) :
must supply a function skeleton, explicitly or via an existing
function"
And the full output follows. Any thoughts on what may be happening
and/or how to work around the problem?
Thanks!
install.packages('fields')
Installing package(s) into ?/usr/local/lib/R/site-library? (as ?lib? is unspecified) --- Please select a CRAN mirror for use in this session --- CRAN mirror 1: Argentina (La Plata) 2: Argentina (Mendoza) [...] Selection: 1 also installing the dependency ?spam? trying URL 'http://mirror.fcaglp.unlp.edu.ar/CRAN/src/contrib/spam_0.29-1.tar.gz' Content type 'application/x-gzip' length 396179 bytes (386 Kb) opened URL ================================================== downloaded 386 Kb trying URL 'http://mirror.fcaglp.unlp.edu.ar/CRAN/src/contrib/fields_6.6.3.tar.gz' Content type 'application/x-gzip' length 2488570 bytes (2.4 Mb) opened URL ================================================== downloaded 2.4 Mb * installing *source* package ?spam? ... ** libs gfortran -fpic -O3 -pipe -g -c bckslvmodified.f -o bckslvmodified.o gfortran -fpic -O3 -pipe -g -c cholmodified.f -o cholmodified.o gfortran -fpic -O3 -pipe -g -c dist.f -o dist.o gfortran -fpic -O3 -pipe -g -c fromsparsekit.f -o fromsparsekit.o gfortran -fpic -O3 -pipe -g -c kronecker.f -o kronecker.o gfortran -fpic -O3 -pipe -g -c permutation.f -o permutation.o gfortran -fpic -O3 -pipe -g -c rowcolstats.f -o rowcolstats.o gfortran -fpic -O3 -pipe -g -c spamown.f -o spamown.o gfortran -fpic -O3 -pipe -g -c spamown2.f -o spamown2.o gfortran -fpic -O3 -pipe -g -c xybind.f -o xybind.o gcc -shared -o spam.so bckslvmodified.o cholmodified.o dist.o fromsparsekit.o kronecker.o permutation.o rowcolstats.o s\ pamown.o spamown2.o xybind.o -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR installing to /usr/local/lib/R/site-library/spam/libs ** R ** data ** moving datasets to lazyload DB ** demo ** inst ** preparing package for lazy loading Creating a new generic function for "print" in "spam" Creating a new generic function for "summary" in "spam" Creating a new generic function for "diag" in "spam" Creating a new generic function for "diag<-" in "spam" Creating a new generic function for "t" in "spam" Creating a new generic function for "as.matrix" in "spam" Creating a new generic function for "all.equal" in "spam" Creating a new generic function for "isSymmetric" in "spam" Creating a new generic function for "diff" in "spam" Error in setGeneric(f, where = where) : must supply a function skeleton, explicitly or via an existing function Error : unable to load R code in package 'spam' ERROR: lazy loading failed for package ?spam? * removing ?/usr/local/lib/R/site-library/spam? ERROR: dependency ?spam? is not available for package ?fields? * removing ?/usr/local/lib/R/site-library/fields? The downloaded packages are in ?/tmp/RtmpauQxtX/downloaded_packages? Warning messages: 1: In install.packages("fields") : installation of package 'spam' had non-zero exit status 2: In install.packages("fields") : installation of package 'fields' had non-zero exit status
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