David.
> argument 'lib' is missing: using
> '/home/pedro/R/x86_64-unknown-linux-gnu-library/2.11'
> Warning message:
> In getDependencies(pkgs, dependencies, available, lib) :
> package ?h5r? is not available
>> install.packages('/home/pedro/h5r_1.4.7.tar.gz',repos=NULL,type='source')
> Warning in install.packages("/home/pedro/h5r_1.4.7.tar.gz", repos = NULL, :
> argument 'lib' is missing: using
> '/home/pedro/R/x86_64-unknown-linux-gnu-library/2.11'
> * installing *source* package ?h5r? ...
> checking for gcc... gcc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... yes
> checking whether we are cross compiling... no
> checking for suffix of executables...
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether gcc accepts -g... yes
> checking for gcc option to accept ISO C89... none needed
>
>
> checking for library containing inflate... -lz
> checking for library containing H5open... no
> configure: error: Can't find HDF5
> ERROR: configuration failed for package ?h5r?
> * removing ?/home/pedro/R/x86_64-unknown-linux-gnu-library/2.11/h5r?
> Warning message:
> In install.packages("/home/pedro/h5r_1.4.7.tar.gz", repos = NULL, :
> installation of package '/home/pedro/h5r_1.4.7.tar.gz' had non-zero exit
> status.
>
> I tried to reinstall HDF5, R and even the whole OS and do it all over
> again. Also tried to add the library to the environment table, do it from
> the library's directory and nothing works.
>
> Is there someone who had the same error and was able to solve it?
> Is there someone who as a clue how to solve?
>
> I'm sorry if there is a similar post around, I've seen some but I don't
> find one where the problem is solved.
> Best regards!
>
> *Pedro*
>
> [[alternative HTML version deleted]]
>
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David Winsemius
Alameda, CA, USA