Boxplot colors
## Shane,
## This uses your color_list. Your other variables weren't included
in the email
## so I invented some data.
## I recommend bwplot() using panel=panel.bwplot.superpose
## and I also show how to use boxplot()
## install.packages("HH") ## if necessary.
library(HH)
## install.packages("reshape2") ## if necessary.
library(reshape2)
## you didn't include data, so I am making up some data
pH <- data.frame(matrix(rnorm(200), 10, 20))
bwplot(value ~ variable, data=melt(pH), col=unlist(colors_list),
panel=panel.bwplot.superpose, groups=variable)
boxplot(value ~ variable, data=melt(pH), col=unlist(colors_list))
## Rich
On Thu, May 22, 2014 at 5:50 AM, Shane Carey <careyshan at gmail.com> wrote:
Hi
Im producing boxplots based on factors and rearranging them by median (This
is for a Geochemistry element). Im giving each boxplot a unique color based
on its level (factor) name.
Im trying to produce a look up list to produce these colors as the order of
the boxplots will change from element to element.
Here is by color lool up and boxplot code:
colors_list<-list("Dalradian Appin Group quartzite"="#FFFF00","Sperrins
Dalradian (position uncertain)"="#D7D79E",
"Namurian sandstone, shale"="#C7D79E","Lr-Mid Ordovocian
acid volcanics"="#FFD37F",
"Tertiary granite, felsite"="#FF5500","Caledonian
appinite suite"="#946379",
"Dalradian Argyll Gp quartzite"="#FFFF00","Slishwood
Division" ="#FFEDCC",
"Dalradian S Highland Gp volcanics"="#00E6A9","LEITRIM
GP; Visean mudstone, sandstone"="#E6CCCC",
"Dalradian Argyll Group"="#FFD9C7","Metadolerite or
amphibolite"="#4C7300",
"Caledonian granite"="#FF7F7F","Dalradian Appin
Group"="#9EAAD7",
"Lr-Mid Ordovician basic volcanics"="#448970","Ordovician
Granite"="#E60000",
"Tertiary basic intrusion"="#8400A8","Dalradian Argyll Gp
volcanics"="#00E6A9",
"VISEAN \"\"basal clastics\"\""="#73A6A6","Carboniferous
volcs & minor intrus"="#AAFF00",
"Metagabbro, metadiorite (Tyrone Plu"="#00A885","TYRONE
GP; Visean mudstone, sandstone"="#CC9999",
"Late Visean-Westphalian 'ORS'"="#F5A27A","Dalradian S
Highland Group"="#FFD9C7",
"Mid Devonian ORS"="#FFD37F","Mid-Up Ordovician
slate"="#C2753D",
"Interbasaltic formation laterite, b"="#FFFF00","Visean
shelf limestone, shale"="#FF00C5",
"Tertiary rhyolite (volc&intru)"="#FFEABE","COURCEYAN
\"\"basal clastics\"\""="#4D8099",
"Up Dev-Lr Carb ORS"="#CDAA66","Tyrone CI
(Corvanaghan=?Slishwood"="#C9FFC9",
"Visean basinal limestone \"\"Calp\"\""="#CFD6EB","Mid-Up
Ordovician g'wacke, sndst, shale"="#C29ED7",
"Up Silurian - Lr Devonian ORS"="#CD8966","Westphalian
shale, sandstone"="#B2B2B2",
"Upper Basalt Formation"="#FAC2E0","Causeway Tholeiite
Mbr"="#C29ED7",
"Courceyan limestone"="#73B2FF","Tertiary minor
volcanics"="#E600A9",
"Silurian sandstone, g'wacke, shale"="#ADE6D1","Up
Cretaceous limestone"="#73FFDF",
"Lower Basalt Formation"="#E0A8C7","Ballycastle
succession"="#CCB3B3",
"Navan Group"="#408CBF","Devonian basic volcs, minor
intrus"="#A5F57A",
"Up. Ord-Sil \"\"Moffat shale\"\"
etc."="#FFFFDB","Oligocene clay, sand"="#704489",
"Lr Jurassic mudstone"="#704489","Lr Jurassic
mudstone"="#267300",
"Mid-Up Ordovician acid volcanics"="#448970","Armagh
Gp"="#8073B3",
"Rathkenny Formation"="#704489","Triassic
sandstone"="#F7DB5E",
"Waulsortian Limestones"="#B2B2B2","Permian
sandstone"="#F5CA7A",
"Mid-Up Ordovician basic volcanics"="#448970")
boxplot(na.omit(C_pH$DATA.pH)~bymedian,axes=FALSE,horizontal=TRUE,col=unlist(colors_list),outwex=one,whisklty
= "solid",whisklwd=lwth,outcol= "black", outpch=dtsym, outcex=dtsize)
However it is not reading the colors based on the color_list given here.
Anyone know how to solve this?
Thanks for your help
--
Shane
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