Message-ID: <1304519268530-3495734.post@n4.nabble.com>
Date: 2011-05-04T14:27:48Z
From: Muhidini
Subject: Distance measure in heatmaps
Hi,
First- I am relatively new to R and would therefore greatly appreciate any
kind of help from you !
I am currently trying to use R to make a heatmap using the Pheatmap package.
My question: I want to include a different distance measure than the ones
given by the implemented hclust function in the pheatmap package (such as
euclidean etc.). I have calculated a distance matrix somewhere else (unifrac
for those who are interested) and want to cluster my columns according to
this matrix. Is there a way to do this ?
Thanks for any kind of input
Muhidini
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