Message-ID: <CAEjKTpaNf1=884s+7KqCJ+cK9AmnV8qPLVDz2TOScipzy1=cwg@mail.gmail.com>
Date: 2014-08-29T00:01:36Z
From: Cara Fiore
Subject: distance matrix from metaMDS
Dear R users,
I would like to access the distance matrix generated by metaMDS as well as
use the dist function to calculate the euclidean distance for each axis in
the NMDS. I am having trouble finding a way to access these variables and
any help is greatly appreciated.
For the distance matrix I know I could just calculate the bray-curtis
distance but it would be nice to know how to get it from the NMDS function.
For the euclidean distance, the only thing I can find within metaMDS is the
score function but there must be some way for me to call on/access the
ordination distance for one axis right?
The reason for this is I would like to do something like the stressplot
function but for each axis.
Thank you,
Cara
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