grofit package problem inputting dataset
Your "csv" output doesn't have any commas in it. Your email is in HTML format so we cannot trust it to show what is really there (read the Posting Guide). The sink function forwards stuff that would have been printed to a file, but that isn't a particularly good way to exchange data with other software.
I use
write.table(foo,"data.csv",sep=",",row.names=FALSE)
to export csv data.
---------------------------------------------------------------------------
Jeff Newmiller The ..... ..... Go Live...
DCN:<jdnewmil at dcn.davis.ca.us> Basics: ##.#. ##.#. Live Go...
Live: OO#.. Dead: OO#.. Playing
Research Engineer (Solar/Batteries O.O#. #.O#. with
/Software/Embedded Controllers) .OO#. .OO#. rocks...1k
---------------------------------------------------------------------------
Sent from my phone. Please excuse my brevity.
On August 8, 2014 10:19:48 PM PDT, "Fethe, Michael" <mfethe1 at vols.utk.edu> wrote:
I've recently wanted to analyze some data sets of growth curves; so, I decided to try out the grofit package the dataset inputting gave me some issues. I've been trying to replicate the example from the grofit package with R
foo <- ran.data(100, 25)
time <- foo$time data <- foo$data
write.csv(file="data.csv", foo)
sink(file="sink.txt")
foo
sink()
also to see if there is another problem I'm missing i've used sink() to see the actual output of this data. The sink call provides a dataframe object, however I'm trying to use my own data in this. Is there a way to create the dataframe object in excel (I've tried following the example from the write.csv() output). I know there is a problem with the input method by following the .csv output and i could use follow the sink() output to create my data frame object; however, I'm not sure about how i would do this with a large dataset with lets say 1000 data points. Has anyone ran into this issue and is there a quick work around? the sink() output $data X1 X2 X3 X4 X5 X6 X7 X8 X9 X10 X11 X12 X13 X14 X15 X16 X17 1 Test I A 0.06195419 0.314959772 0.398263408 0.091132317 1.012083039 0.35122189 1.78719671 2.47453614 3.25305005 3.9829927 5.2863775 5.8576975 7.2154323 8.501599 8.405278 2 Test I B 0.09543701 0.441797809 -0.345308045 0.462532336 1.324153423 1.20722268 1.71422886 2.40135394 2.79558398 3.8981917 5.3614344 5.8423570 6.8511538 7.192188 8.344946 3 Test I C 0.16386938 -0.178975999 0.464790443 0.325264753 0.033088580 0.79395919 0.63525411 1.71685521 2.62738577 2.5209004 4.4535178 4.9102966 6.8867905 6.996433 7.553863 4 Test I D 0.14198175 0.100778235 -0.164231759 -0.322266709 0.571067561 1.24234632 1.54056165 1.96933568 2.97097469 3.7711348 3.8414402 5.2768758 5.6688960 7.041779 7.651093 5 Test I E 0.25390711 0.039312093 -0.463351713 0.628339527 0.418403984 0.56460811 1.26348242 1.56823878 1.93588943 3.3141874 3.0360158 3.7567956 5.6896075 5.873556 6.524754 6 Test I F 0.22319304 -0.076464713 0.074501305 -0.160924707 0.384392150 0.76412340 1.36118116 1.50356468 2.53322106 3.4924520 4.5054475 4.6222326 5.5347148 6.349000 7.482548 7 Test I G 0.28095487 -0.728248588 0.479450323 0.542078371 0.757460716 0.10292177 1.01113655 1.14448036 2.19976257 3.3030023 3.0848547 4.1877661 5.2832997 5.485825 6.375234 8 Test I A 0.32135093 -0.036980401 -0.068313544 -0.059620107 0.440995143 0.48424749 0.65644521 1.38482000 2.05964880 2.2548116 2.6813025 3.5085200 4.7988415 5.017753 5.405950 9 Test I B 0.31930456 0.169104577 0.100637447 0.070003632 0.304209263 1.72301034 ... $time [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] [,11] [,12] [,13] [,14] [,15] [,16] [,17] [,18] [,19] [,20] [1,] 1.105562 2.429351 3.303547 4.941900 5.370762 6.939251 7.546835 8.400435 9.602104 10.85058 11.27732 12.12658 13.80886 14.03953 15.88684 16.63256 17.85349 18.29452 19.94482 20.74473 [2,] 1.842357 2.183849 3.528340 4.761010 5.610834 6.473241 7.771216 8.575116 9.544966 10.79126 11.61007 12.91479 13.21070 14.27869 15.30520 16.32062 17.71822 18.94936 19.58821 20.46276 [3,] 1.787510 2.734994 3.063325 4.788528 5.676988 6.096337 7.373838 8.047332 9.042756 10.35715 11.47604 12.84095 13.14183 14.77351 15.81132 16.63433 17.37387 18.51372 19.83332 20.74899 [4,] 1.074662 2.386418 3.734951 4.889867 5.994899 6.483399 7.603956 8.826142 9.536391 10.01653 11.03079 12.60530 13.00965 14.70169 15.17157 16.75678 17.85311 18.22975 19.28407 20.73184 [5,] 1.748113 2.185892 3.236870 4.294671 5.093055 6.910312 7.881226 8.067719 9.632505 10.26807 11.03523 12.75277 13.66110 14.30814 15.61313 16.62628 17.98222 18.95378 19.46946 20.17275 the write.csv() output data.X1 data.X2 data.X3 data.X4 data.X5 data.X6 data.X7 data.X8 data.X9 1 Test I A 0.061954188 0.314959772 0.398263408 0.091132317 1.012083039 0.351221894 1.787196715 2 Test I B 0.095437013 0.441797809 -0.345308045 0.462532336 1.324153423 1.207222678 1.714228858 3 Test I C 0.16386938 -0.178975999 0.464790443 0.325264753 0.03308858 0.793959194 0.63525411 4 Test I D 0.141981749 0.100778235 -0.164231759 -0.322266709 0.571067561 1.242346317 1.540561647 5 Test I E 0.253907113 0.039312093 -0.463351713 0.628339527 0.418403984 0.564608113 1.263482418 6 Test I F 0.223193041 -0.076464713 0.074501305 -0.160924707 0.38439215 0.764123401 1.361181159 7 Test I G 0.280954867 -0.728248588 0.479450323 0.542078371 0.757460716 0.102921772 1.011136548 8 Test I A 0.321350933 -0.036980401 -0.068313544 -0.059620107 0.440995143 0.48424749 0.656445215 9 Test I B 0.319304561 0.169104577 0.100637447 0.070003632 0.304209263 1.723010338 0.471089175 10 Test I C 0.340566295 0.093127169 0.033974387 0.245478841 0.393911475 0.203389585 1.005453213 11 Test I D 0.333709948 0.333333875 0.617596536 -0.155448079 0.610516542 0.198084915 0.436375715 12 Test I E 0.447724878 0.143374568 -0.109355736 0.51752932 0.798150461 0.195199233 0.401329643 13 Test I F 0.390981428 -0.142028672 0.139992973 0.350846958 0.674888644 0.760292796 0.364816546 14 Test I G 0.495102072 0.428716874 0.448110388 0.301635201 0.440899901 1.023213179 0.801876373 15 Test I A 0.531173467 -0.148918942 0.05126733 -0.454508347 0.487135445 -0.073263324 0.012359952 16 Test I B 0.565521033 0.136874075 0.067359297 0.199090002 0.251350792 0.73318158 0.41629902 ? No luck in mimicking these examples for me. [[alternative HTML version deleted]]
______________________________________________ R-help at r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.