Command line option to an R script running through Rscript
On Aug 19, 2009, at 9:21 PM, Peng Yu wrote:
Hi, I know that I can use the following script to get the command line options for an R script. But the output shows two many irrelevant
That would be "too many".
arguments. For example, I only want to pass "a", "b" and "c" to the script. The first 5 elements in the variable 'args' are not what I want. I am wondering what is the correct way to pass command line options to an R script. Regards, Peng $ Rscript args.R a b c
args=commandArgs() args
[1] "/usr/local/lib64/R/bin/exec/R" "--slave" [3] "--no-restore" "--file=args.R" [5] "--args" "a" [7] "b" "c"
?commandArgs commandArgs(trailingOnly=TRUE)
David Winsemius, MD Heritage Laboratories West Hartford, CT