Vegemite Function is Cowardly refusing
Ansley Silva <daily.puja <at> gmail.com> writes:
R version 3.2.2. library(vegan) I was to look at community tables from my dendrograms and am trying out the vegemite command. This is the error I get: Error in vegemite(apst, apst.clusters) : Cowardly refusing to use longer than 1 char symbols: Use scale I thought the problem was that I was using the log transformed data, but I tried it on the raw (which is single digit numbers), and still no luck. Any suggestions would be appreciated.
I imagined that the error message is clear: vegemite only uses one-character symbols (because the result is so compact). The example data you had with this message had numbers up to 55 -- and that is a two-digit number. The message also suggest that you use 'scale' which is an argument of vegemite() to transform numbers to one-charactar symbols. You can also transform your data to to one-digit width yourself, and vegemite() will be happy. cheers, Jari Oksanen