I made the package depmix for fitting hidden markov models.
After updating R to version 2.2.0 on my PC I got the following error when
installing the package from a local directory. One of the C files includes
the R.h file which apparently causes problems.
I call
R CMD INSTALL --docs="normal" depmix
and I get the following error:
make[3]: *** No rule to make target 'C:/rw2011/include/R.h', needed by
derdist.o. Stop.
You probably did build from a poluted directory containing an old
".../src/Makedeps" file. Remove it and try again.