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Package pdf problems

stephen sefick 
I am checking a package with R CMD check and everything is fine until
the pdf portion of the checking process and the errors documented at
the end of this message happen.  I have looked at the pdf that is
created and the typesetting is not perfect, but it is acceptable
(readable).  I am no good at latex (something I plan to remedy in the
next large paper I have to write), so is this acceptable for CRAN.  I
have not changed the files and this error message did not show up
until I upgraded to 2.8.1 .  Any help would be appreciated.

Mac OS X 10.5.6
R 2.8.1

* checking StreamMetabolism-manual.tex using pdflatex ... ERROR
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
 []\T1/pcr/m/n/9 DOTemp[,2], "8/18/70", "00:00:00", "23:45:00", "06:00:00", "20
:15:00", 96)[]
:15:00", 96)[]
 []


Overfull \hbox (4.38043pt too wide) in paragraph at lines 225--225
 []\T1/pcr/m/n/9 DOTemp[,2], "8/18/70", "00:00:00", "23:45:00", "06:00:00", "20
:15:00", 96)[]
:15:00", 96)[]
 []

[6]
Overfull \hbox (119.32596pt too wide) in paragraph at lines 277--281
 []\T1/pcr/m/n/9 DOTemp[,2], "8/18/70", "00:00:00", "23:45:00", "06:00:00", "20
:15:00", 96)[]
:15:00", 96)[]
 []

[8] [9] [10] [11] [12] [13]
! Extra }, or forgotten $.
! Extra }, or forgotten $.
<template> \unskip \hfil }
                          \hskip \tabcolsep \endtemplate
l.586 }

! Missing $ inserted.
<inserted text>
                $
l.586 }

! Missing } inserted.
<inserted text>
                }
l.586 }