logit regression, test among groups
On Tue, 28 May 2002, Martin Henry H. Stevens wrote:
Dear all: My logistic regression model includes one qualitative and one quantitative predictor variable, aes <- glm(p.a ~ spp * log(light), family=binomial(link=logit)), where spp is abundance of 3 species and light is subcanopy light availability varying from 0 1. I want to test differences among levels of the quantitative variable at a value of x other than the current log(light)=0. I tried using I(log(light+.5)) but this caused serious lack of fit (AIC went from 1574 to 1656, and diagnostic plots demonstrated poor fit). How would create a model statement such that I test differences among groups at log(light)=approx. 2? Many thanks.
aes <- glm(p.a ~ spp * I(log(light)-log(0.5)), family=binomial(link=logit)), will test at light==0.5, and so on. Theoretically it's horribly inefficient to waste perhaps whole tenths of a second refitting the model when you can in fact compute these contrasts from the fitted parameters and covariance matrices, and Frank Harrell's solution is much nicer. -thomas -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the "body", not the subject !) To: r-help-request at stat.math.ethz.ch _._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._