s3 methods on S4 objects
On 01/12/2011 10:54 PM, steven mosher wrote:
I have J Chambers wonderful text ( Software for data Analysis) and I've been
trying
my hand at some very routine S4 OOP development.
One of the things I was trying to do was to create some very basic S4
classes. The first
was simply a class that had a data.frame as part of its representation.
setClass("df",representation(dirframe="data.frame"))
The object basically contains a data.frame that represents a file directory
listing
with a column named filename, size, time, etc.
And then I have methods for doing various things with this object.
I then tried to tackle the problem of coercing this S4 object to a
data.frame. Again just a learning exercise.
The goal would be able to make a call like this
testFrame <- as.data.frame(x)
where x, was an object of class "df"
If I try to define "as.data.frame" as a S4 method, then I can make it work,
but I then destroy the S3 functionality
of as.data.frame, so that if I were to try to coerce a matrix to a
data.frame it would work.
Hi Steven --
This works for me
setClass("A", representation=representation(df="data.frame"))
setMethod("as.data.frame", "A",
function(x, row.names=NULL, optional=FALSE, ...)
{
## implementation, e.g.,
callGeneric(x at df, row.names=row.names, optional=optional, ...)
})
as.data.frame(new("A"))
Object of class "data.frame" data frame with 0 columns and 0 rows
as.data.frame(matrix(0, 3, 5))
V1 V2 V3 V4 V5 1 0 0 0 0 0 2 0 0 0 0 0 3 0 0 0 0 0 Maybe you call setGeneric (no need to, setMethod will promote as.data.frame automatically) in a way that does not specify the default (arg useAsDefault) correctly? Martin
So, I guess my question is what do I do, write an s3 method for as.data.frame that takes a "df" object as a paramter? The book wasn't exactly clear ( or I'm not that bright), or is there a way to make the S4 method I wrote "as.data.frame" call the S3 method if needed? [[alternative HTML version deleted]]
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