calling R from a shell script and have it display graphics
How about saving to png and writing a small html file and then launching a browser?
On Thu, Feb 12, 2004 at 07:45:42AM -0800, Don MacQueen wrote:
I don't know about the "simpler" part, but you could use the tcltk package to put up a window that prompts the user to continue. -Don At 11:57 AM +0100 2/12/04, Christophe Pallier wrote:
Hello,
I am running R under Linux/x11.
I would like to call R from a shell script and have it display a
series of graphics.
The graphics should remain visible until the user clicks or presses a key.
I first tried R BATCH, but it does not load the x11 module, making
it impossible to open x11 or png devices.
Then, I tried to call R with a 'here' script:
R --vanilla --quiet --args text.txt <<'EOF'
file=commandArgs()[5]
cat('processing ',file,'\n')
...
x11()
plot(f2,log='xy',type='b',las=1,cex=.5,xlab='rang',ylab='freq')
Sys.sleep(10)
q()
EOF
The problem with this approach is that the script cannot interact
with the user.
par(ask=T) will fail because it reads input from the script rather
than from the keyboard.
While I am writing this, a solution comes to my mind: I could save
all the graphics in png format (using R <script.R), and when it is
finished, call ImageMagick's display to show all the png (or use any
other diaporama system). However, I find it a dirty hack.
Is there a simpler and cleaner way to achieve this?
Christophe Pallier
www.pallier.org
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-- -------------------------------------- Don MacQueen Environmental Protection Department Lawrence Livermore National Laboratory Livermore, CA, USA
______________________________________________ R-help at stat.math.ethz.ch mailing list https://www.stat.math.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide! http://www.R-project.org/posting-guide.html