re form data for aov()?
As a followup, I show below what I get if I "break out" the variables by making a new data frame with new (boolean) columns that indicate the treatment. (The experiment was germ count on hands, after cleansing with 4 different methods.) What I'm hoping is to find a way to do this in a less "hard-wired" way (i.e. in which I do not have to change my code for every application, explicitly naming the factors).
dd<-data.frame(d, Alcohol.Spray=d$Method=="Alcohol.Spray", Antibacterial.Soap=d$Method=="Antibacterial.Soap", Soap=d$Method=="Soap",Water=d$Method=="Water") anova(aov(Bacterial.Counts ~ Alcohol.Spray+Antibacterial.Soap+Soap+Water, data=dd))
Analysis of Variance Table
Response: Bacterial.Counts
Df Sum Sq Mean Sq F value Pr(>F)
Alcohol.Spray 1 27473 27473 19.4822 0.0001374 ***
Antibacterial.Soap 1 1925 1925 1.3653 0.2524658
Soap 1 484 484 0.3432 0.5626651
Residuals 28 39484 1410
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Signif. codes: 0 ?***? 0.001 ?**? 0.01 ?*? 0.05 ?.? 0.1 ? ? 1
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