Hi again,
I almost figured this out, but still need some help on the last part.
I can use prop.table to get survival probabilities...
A <- t(prop.table( table(trans$class, trans$fate),1) )
rep seed veg
dead 0.0000000 0.3333333 0.0000000
rep 0.5000000 0.0000000 1.0000000
veg 0.5000000 0.6666667 0.0000000
so now I just need to format the matrix. I thought I could create a
matrix of zeroes using size class names,
dev<- c("seed","veg", "rep").
A0<-matrix(numeric(9), nrow=3, dimnames=list(dev,dev) )
seed veg rep
seed 0 0 0
veg 0 0 0
rep 0 0 0
but how do I assign values in A to the corresponding rows and columns in
A0? I hope there is an easy solution that I'm overlooking.
seed veg rep
seed 0 0 0
veg 0.67 0 0.5
rep 0 1 0.5