functions pandit and treebase in the package apTreeshape
Thanks! As noted by an earlier poster, these functions seem to have been removed from the package. It might be worth contacting the maintainer to ask if any equivalents are available ... Cheers Andrew
On Sat, May 07, 2011 at 09:56:49AM +0200, Arnau Mir wrote:
El 07/05/11 09:49, Arnau Mir escribi?:
El 06/05/11 01:33, Andrew Robinson escribi?:
Hi Arnau, please send the output of sessionInfo() and the exact commands and response that you used to install and load apTreeshape.
Sorry, I forgot the commands. Here they are:
library(apTreeshape)
Loading required package: ape
Loading required package: quantreg
Loading required package: SparseM
Package SparseM (0.89) loaded.
To cite, see citation("SparseM")
Attaching package: 'SparseM'
The following object(s) are masked from 'package:base':
backsolve
Package quantreg (4.67) loaded.
To cite, see citation("quantreg")
pandit(2)
Error: no se pudo encontrar la funci?n "pandit" (the function "pandit" cannot be found)
treebase(2)
Error: no se pudo encontrar la funci?n "treebase" (the function treebase cannot be found)
sessionInfo()
Arnau.
Here It is:
sessionInfo()
R version 2.12.1 (2010-12-16) Platform: x86_64-pc-linux-gnu (64-bit) locale: [1] LC_CTYPE=es_ES.UTF-8 LC_NUMERIC=C [3] LC_TIME=es_ES.UTF-8 LC_COLLATE=es_ES.UTF-8 [5] LC_MONETARY=C LC_MESSAGES=es_ES.UTF-8 [7] LC_PAPER=es_ES.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=es_ES.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] quantreg_4.67 SparseM_0.89 ape_2.5-3 apTreeshape_1.4-3 loaded via a namespace (and not attached): [1] gee_4.13-14 grid_2.12.1 lattice_0.19-17 nlme_3.1-97 Arnau.
Cheers Andrew On Thu, May 05, 2011 at 04:42:58PM +0200, Arnau Mir wrote:
Hello. I'm trying to use the functions pandit and treebase. They are in the package apTreeshape. Once I've loaded the package, R responses: - no function pandit/treebase. Somebody knows why or what is the reason? Thanks, Arnau. ------------------------------------------------------------ Arnau Mir Torres Edifici A. Turmeda Campus UIB Ctra. Valldemossa, km. 7,5 07122 Palma de Mca. tel: (+34) 971172987 fax: (+34) 971173003 email: arnau.mir at uib.es URL: http://dmi.uib.es/~arnau ------------------------------------------------------------ [[alternative HTML version deleted]]
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-- ------------------------------------------------------------ Arnau Mir Torres Edifici A. Turmeda Campus UIB Ctra. Valldemossa, km. 7,5 07122 Palma de Mca. tel: (+34) 971172987 fax: (+34) 971173003 email: arnau.mir at uib.es URL: http://dmi.uib.es/~arnau ------------------------------------------------------------
Andrew Robinson Program Manager, ACERA Department of Mathematics and Statistics Tel: +61-3-8344-6410 University of Melbourne, VIC 3010 Australia (prefer email) http://www.ms.unimelb.edu.au/~andrewpr Fax: +61-3-8344-4599 http://www.acera.unimelb.edu.au/ Forest Analytics with R (Springer, 2011) http://www.ms.unimelb.edu.au/FAwR/ Introduction to Scientific Programming and Simulation using R (CRC, 2009): http://www.ms.unimelb.edu.au/spuRs/