zero random effect sizes with binomial lmer
Daniel Ezra Johnson <johnson4 <at> babel.ling.upenn.edu> writes: ...
If one compares the random effect estimates, in fact, one sees that they are in the correct proportion, with the expected signs. They are just approximately eight orders of magnitude too small. Is this a bug?
... BLUPs are essentially shrinkage estimates, where shrinkage is determined with magnitude of variance. Lower variance more shrinkage towards the mean - zero in this case. So this is not a bug. Gregor