error using lapply with oneway_test (coin package)
That's a scoping problem, I think a bug in oneway_test. Because the formula var ~ group is created with the anonymous function within lapply, its environment should be the evaluation frame of that function call and var should be visible. If I replace oneway_test() with lm() it works. I think a workaround is to construct the data argument explicitly, i.e. lapply(y, function(var) oneway_test(var ~ group, data.frame(var=var, group=group)))
yes, that would be the fix:
R> lapply(y, function(var) oneway_test(var ~ group,
data = data.frame(var = var, group = group)))
$V1
Asymptotic 2-Sample Permutation Test
data: var by group (1, 2)
Z = -1.2054, p-value = 0.2280
alternative hypothesis: true mu is not equal to 0
$V2
Asymptotic 2-Sample Permutation Test
data: var by group (1, 2)
Z = 0.5672, p-value = 0.5706
alternative hypothesis: true mu is not equal to 0
Thanks, Duncan.
Torsten
I've cc'd Torsten Hothorn, the maintainer of coin. Duncan Murdoch
Thank you, Matthieu Matthieu Dubois Post-doctoral fellow Psychology and NeuroCognition Lab (CNRS UMR 5105) Universit? Pierre Mend?s-France BP47 --- 38040 Grenoble Cedex 9 --- France Email: matthieu.dubois at upmf-grenoble.fr Gmail: matthdub at gmail.com http://web.upmf-grenoble.fr/LPNC/membre_matthieu_dubois [[alternative HTML version deleted]] ------------------------------------------------------------------------
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