non-linear optimisation ODE models
Hi, fitting ODE models may also be done with package FME, see: Soetaert K, Petzoldt T. Inverse modelling, sensitivity and Monte Carlo analysis in R using package FME. Journal of Statistical Software. 2010(33): 1?28. http://dx.doi.org/10.18637/jss.v033.i03 or the (interactive) poster at: http://desolve.r-forge.r-project.org/user2014/examples/FME/fit_twocomp.svg Regards, Thomas P. Am 16.02.2017 um 19:41 schrieb David Winsemius:
On Feb 15, 2017, at 1:43 PM, Jim Lemon <drjimlemon at gmail.com> wrote: Hi Malgorzata, The function "rxnrate" seems to want three values in a list with the names "k1", "k2" and "k3". If you are passing something with different names, it is probably going to complain, so the names "A", "B" and "C" may be your problem. I can't run the example, so this is a guess.
There's a more readable version at: http://stackoverflow.com/questions/42256509/how-to-feed-data-into-ide-while-doing-optimisation It can be run, but does not produce the errors offered when I do so.