Message-ID: <57149166.8000905@gmail.com>
Date: 2016-04-18T07:48:54Z
From: Angelo Varlotta
Subject: 'nlme' package not compiling
Hi,
I'm trying to install from source code the 'nlme' package in
RStudio. When I try, I get the following error message:
ld: warning: directory not found for option
'-L/usr/local/lib/gcc/x86_64-apple-darwin13.0.0/4.8.2'
ld: library not found for -lgfortran
clang: error: linker command failed with exit code 1 (use -v to
see invocation)
make: *** [nlme.so] Error 1
ERROR: compilation failed for package ?nlme?
* removing
?/Library/Frameworks/R.framework/Versions/3.2/Resources/library/nlme?
* restoring previous
?/Library/Frameworks/R.framework/Versions/3.2/Resources/library/nlme?
Warning in install.packages :
installation of package ?nlme? had non-zero exit status
I'm using gfortran 4.8 from Macports and running OS X 10.11.4
with RStudio Version 0.99.893. I've tried to use the FLIBS
command in R:
FLIBS="-L/opt/local/lib/gcc48/gcc/x86_64-apple-darwin15/4.8.5/"
so that it knows where the Fortran libraries are at and compile
again, but it still searchesregardless for the directory:
/usr/local/lib/gcc/x86_64-apple-darwin13.0.0/4.8.2.
which of course doesn't exist. Any suggestions?
Cheers,
Angelo
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