Skip to content
Prev 314328 / 398503 Next

thanks -- Re: syntax for identifying more than one

HI Greg,
Sorry, I misunderstand your question.
I am not sure whether it works with numSummary() from library(Rcmdr). 
You could use other ways, such as:
test<-read.table(text="
?id year incidents
?100??? 1??????? 0
?101??? 1??????? 1
?102??? 1??????? 21
?100??? 1??????? 27
?101??? 1??????? 3
?102??? 1??????? 12
?100??? 2??????? 5
?101??? 2??????? 5
?102??? 2??????? 19
?100??? 2??????? 10
?101??? 2??????? 2
?102??? 2??????? 12
?100??? 3??????? 0
?101??? 3??????? 0
?102??? 3??????? 22
?100??? 3??????? 14
?101??? 3??????? 16
?102??? 3??????? 13
?",sep="",header=TRUE)

test1<-test
test1<-within(test1,{id<-factor(id);year<-factor(year)})
library(plyr)
ddply(test,.(id,year),summarise,mean=mean(incidents),sd=sd(incidents),n=length(incidents))
#or
by(test1$incidents,list(test1$id,test1$year),FUN=function(x) c(mean=mean(x),sd=sd(x),n=length(x)))
#or
with(test,aggregate(incidents,by=list(id,year),function(x) c(mean=mean(x),sd=sd(x),n=length(x))))
#or
library(data.table)
test1<- data.table(test)
test1[,list(mean=mean(incidents),sd=sd(incidents),n=length(incidents)),by=list(id,year)]

library(psych)
res<-describeBy(test[,3],group=list(test$id,test$year),mat=FALSE)
res
#: 100
#: 1
#? var n mean??? sd median trimmed?? mad min max range skew kurtosis?? se
#1?? 1 2 13.5 19.09?? 13.5??? 13.5 20.02?? 0? 27??? 27??? 0??? -2.75 13.5
#------------------------------------------------------------ 
#: 101
#: 1
#? var n mean?? sd median trimmed? mad min max range skew kurtosis se
1?? 1 2??? 2 1.41????? 2?????? 2 1.48?? 1?? 3???? 2??? 0??? -2.75? 1
------------------------------------------------------------------
A.K.





----- Original Message -----
From: "agreg2 at gmail.com" <agreg2 at gmail.com>
To: smartpink111 at yahoo.com
Cc: 
Sent: Friday, December 28, 2012 6:09 PM
Subject: thanks -- Re: syntax for identifying more than one

Hi Arun,
Thanks for responding to my posted question.? Your example showed how to use numsummary to produce mean incidents, sd incidents, etc. for each level of "id" and for each level of "year."? I'm trying to generate these descriptive stats for each *combination* of "id" and "year."? I could do that in SAS with the following code 

proc means mean std n data=test;
? by id year;
? var incidents;
? output out = testsummary
? ? ? mean = mnincidents
? ? ? std = sdincidents
? ? ? n = nincidnets;
proc print data=testsummary;

Again, thanks for responding to the posted question.

Best wishes,
Greg


<quote author='arun kirshna'>
HI,
You could try that in a list if that is okay.
test<-read.table(text="
id year incidents
100? ? 1? ? ? ? 0
101? ? 1? ? ? ? 1
102? ? 1? ? ? ? 21
103? ? 1? ? ? ? 27
104? ? 1? ? ? ? 3
105? ? 1? ? ? ? 12
100? ? 2? ? ? ? 5
101? ? 2? ? ? ? 5
102? ? 2? ? ? ? 19
103? ? 2? ? ? ? 10
104? ? 2? ? ? ? 2
105? ? 2? ? ? ? 12
100? ? 3? ? ? ? 0
101? ? 3? ? ? ? 0
102? ? 3? ? ? ? 22
103? ? 3? ? ? ? 14
104? ? 3? ? ? ? 16
105? ? 3? ? ? ? 13
",sep="",header=TRUE)
library(e1071)
library(Rcmdr)

res<- lapply(seq_len(ncol(test[,-3])),function(i)
numSummary(test[,3],groups=test[,i]))
names(res)<-names(test)[-3]
res
$id
#? ? ? ?  mean? ? ? ? sd IQR 0%? 25% 50%? 75% 100% data:n
#100? 1.666667 2.8867513 2.5? 0? 0.0?  0? 2.5? ? 5? ? ? 3
#101? 2.000000 2.6457513 2.5? 0? 0.5?  1? 3.0? ? 5? ? ? 3
#102 20.666667 1.5275252 1.5 19 20.0? 21 21.5?  22? ? ? 3
#103 17.000000 8.8881944 8.5 10 12.0? 14 20.5?  27? ? ? 3
#104? 7.000000 7.8102497 7.0? 2? 2.5?  3? 9.5?  16? ? ? 3
#105 12.333333 0.5773503 0.5 12 12.0? 12 12.5?  13? ? ? 3
#
#$year
#? ? ?  mean? ? ? ? sd?  IQR 0%? 25%? 50%?  75% 100% data:n
#1 10.666667 11.325487 17.25? 0 1.50? 7.5 18.75?  27? ? ? 6
#2? 8.833333? 6.177918? 6.50? 2 5.00? 7.5 11.50?  19? ? ? 6
#3 10.833333? 8.953584 12.25? 0 3.25 13.5 15.50?  22? ? ? 6
A.K.

</quote>
Quoted from: 
http://r.789695.n4.nabble.com/syntax-for-identifying-more-than-one-group-in-numsummary-tp4654172p4654185.html
Message-ID: <1356744982.42320.YahooMailNeo@web142604.mail.bf1.yahoo.com>
In-Reply-To: <22352020.87378.1356736157645.JavaMail.nabble@joe.nabble.com>