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plot: x and y chromosomes are missing

The answer to your question probably lies in your data. If you follow the instructions at the footer of every email on this list and provide an example that we can run (reproducible), we will be able to do more than guess.

 http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example

In particular note the recommendation to use the dput function to send us sample data.
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Jeff Newmiller                        The     .....       .....  Go Live...
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Sent from my phone. Please excuse my brevity.
Hermann Norpois <hnorpois at googlemail.com> wrote: